RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 ZNF729A6NN14 1252 aaPredicted RBP18.92■□□□□ 0.62
HOXD1-201ENST00000331462 VASH2Q86V25 355 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 PRR7Q8TB68 274 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 SSX3Q99909 188 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 FREM2Q5SZK8 3169 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 IGHV1-2P23083 117 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 OR2B11Q5JQS5 317 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 RNFT1Q5M7Z0 435 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 SMIM7Q9BQ49 75 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 ARRDC1-AS1Q9H2J1 176 aa18.92■□□□□ 0.62
HOXD1-201ENST00000331462 LNP1A1A4G5 178 aa18.91■□□□□ 0.62
HOXD1-201ENST00000331462 ZNF891A8MT65 544 aaPredicted RBP18.91■□□□□ 0.62
HOXD1-201ENST00000331462 CLDN14O95500 239 aa18.91■□□□□ 0.62
HOXD1-201ENST00000331462 IL2RGP31785 369 aa18.91■□□□□ 0.62
HOXD1-201ENST00000331462 G6PCP35575 357 aa18.91■□□□□ 0.62
HOXD1-201ENST00000331462 NCR3LG1Q68D85 454 aa18.91■□□□□ 0.62
HOXD1-201ENST00000331462 INO80CQ6PI98 192 aaPredicted RBP18.91■□□□□ 0.62
HOXD1-201ENST00000331462 BEND4Q6ZU67 534 aa18.91■□□□□ 0.62
HOXD1-201ENST00000331462 CIB3Q96Q77 187 aaPredicted RBP18.91■□□□□ 0.62
HOXD1-201ENST00000331462 MANBALQ9NQG1 85 aa18.91■□□□□ 0.62
HOXD1-201ENST00000331462 RAB29O14966 203 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 HBZP02008 142 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 GRPP07492 148 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 BRWD1-AS2P59051 145 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 TMEM241Q24JQ0 296 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 OR10D4PQ8NGN7 298 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 GPR61Q9BZJ8 451 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 LAMP3Q9UQV4 416 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 OR5H1A6NKK0 313 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 GATCO43716 136 aaKnown RBP18.9■□□□□ 0.62
HOXD1-201ENST00000331462 S1PR2O95136 353 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 KRASP01116 189 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 MDKP21741 143 aaPredicted RBP18.9■□□□□ 0.62
HOXD1-201ENST00000331462 CEBPDP49716 269 aaPredicted RBP18.9■□□□□ 0.62
HOXD1-201ENST00000331462 PSMB3P49720 205 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 C11orf53Q8IXP5 236 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 SRD5A3Q9H8P0 318 aa18.9■□□□□ 0.62
HOXD1-201ENST00000331462 PFN1P07737 140 aaKnown RBP18.89■□□□□ 0.61
HOXD1-201ENST00000331462 CD59P13987 128 aa18.89■□□□□ 0.61
HOXD1-201ENST00000331462 GFI1BQ5VTD9 330 aa18.89■□□□□ 0.61
HOXD1-201ENST00000331462 OR52L2PQ8NGH6 319 aa18.89■□□□□ 0.61
HOXD1-201ENST00000331462 KLF14Q8TD94 323 aaPredicted RBP18.89■□□□□ 0.61
HOXD1-201ENST00000331462 DTD1Q8TEA8 209 aa18.89■□□□□ 0.61
HOXD1-201ENST00000331462 COQ2Q96H96 371 aa18.89■□□□□ 0.61
HOXD1-201ENST00000331462 CLN8Q9UBY8 286 aa18.89■□□□□ 0.61
HOXD1-201ENST00000331462 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.88■□□□□ 0.61
HOXD1-201ENST00000331462 MLNRO43193 412 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 ZNF816Q0VGE8 651 aaPredicted RBP18.88■□□□□ 0.61
HOXD1-201ENST00000331462 ZNF66Q6ZN08 573 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 TGIF2LYQ8IUE0 185 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 OR10P1Q8NGE3 313 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 OR10A7Q8NGE5 316 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 TAAR6Q96RI8 345 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 CLCF1Q9UBD9 225 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 MED13Q9UHV7 2174 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 DOCK7Q96N67 2140 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 C17orf98A8MV24 154 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 HIST1H1BP16401 226 aaKnown RBP18.88■□□□□ 0.61
HOXD1-201ENST00000331462 FGF7P21781 194 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 MPV17P39210 176 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 NINJ1Q92982 152 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 SLC25A22Q9H936 323 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 PITPNC1Q9UKF7 332 aa18.88■□□□□ 0.61
HOXD1-201ENST00000331462 CHD3Q12873 2000 aaKnown RBP18.87■□□□□ 0.61
HOXD1-201ENST00000331462 WISP2O76076 250 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 CD55P08174 381 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 COX5AP20674 150 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 RPL23P62829 140 aaKnown RBP18.87■□□□□ 0.61
HOXD1-201ENST00000331462 PAX5Q02548 391 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 ADIRFQ15847 76 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 BSXQ3C1V8 233 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 ACP7Q6ZNF0 438 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 ZNF808Q8N4W9 903 aaPredicted RBP18.87■□□□□ 0.61
HOXD1-201ENST00000331462 WDR31Q8NA23 367 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 ZNF383Q8NA42 475 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 TMEM178AQ8NBL3 297 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 OR10G9Q8NGN4 311 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 OR10G7Q8NGN6 311 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 ACTR3CQ9C0K3 210 aaPredicted RBP18.87■□□□□ 0.61
HOXD1-201ENST00000331462 CXXC4Q9H2H0 198 aa18.87■□□□□ 0.61
HOXD1-201ENST00000331462 GUSBP1Q15486 140 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 Q6ZT83 130 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 C16orf82Q7Z2V1 217 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 LURAP1Q96LR2 239 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 NPCDR1Q9BY65 106 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 OBP2BQ9NPH6 170 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 IFNL4K9M1U5 179 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 ZG16O60844 167 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 TNFSF15O95150 251 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 TUBG1P23258 451 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 GNB2P62879 340 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 AESQ08117 197 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 FFAR4Q5NUL3 377 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 DIRC2Q96SL1 478 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 PRDM13Q9H4Q3 707 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 TUBG2Q9NRH3 451 aa18.86■□□□□ 0.61
HOXD1-201ENST00000331462 TRBV23-1A0A0A0MS06 115 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 IGHV3-64DA0A0J9YX35 117 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 WNT9BO14905 357 aa18.85■□□□□ 0.61
HOXD1-201ENST00000331462 IGKV3-15P01624 115 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms