RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TMEM54Q969K7 222 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 APH1AQ96BI3 265 aa20.65■□□□□ 0.9
SOX1-201ENST00000330949 PPBPP02775 128 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 GNB1P62873 340 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 RAC1P63000 192 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 MORN2Q502X0 79 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 FAM69BQ5VUD6 431 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 PLCXD3Q63HM9 321 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 TIPARPQ7Z3E1 657 aaKnown RBP20.64■□□□□ 0.9
SOX1-201ENST00000330949 OR1K1Q8NGR3 316 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 PSMF1Q92530 271 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 COL6A3P12111 3177 aa20.64■□□□□ 0.9
SOX1-201ENST00000330949 LOC105371242A0A075B767 164 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 IGKV1-6A0A0C4DH72 117 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 A8MXE2 369 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 CLDN15P56746 228 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 UBE2G2P60604 165 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 CFHR1Q03591 330 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 KLHDC1Q8N7A1 406 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 ZNF611Q8N823 705 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 Q8N976 141 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 ZNF391Q9UJN7 358 aa20.64■□□□□ 0.89
SOX1-201ENST00000330949 LRP5LA4QPB2 252 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 RNF151Q2KHN1 245 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 TMEM14EPQ6UXP3 125 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 IGHV1OR15-9A0A0B4J2B8 117 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 FAM166BA8MTA8 275 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 GPX1P07203 203 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 GPR27Q9NS67 375 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 OR2W1Q9Y3N9 320 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 NDUFB4O95168 129 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 PMP22Q01453 160 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 OR6C1Q96RD1 312 aa20.63■□□□□ 0.89
SOX1-201ENST00000330949 H3BMH7 237 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 TIAF1O95411 115 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 IGKV1-39P01597 117 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 IGKV1D-39P04432 117 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 SERPINA7P05543 415 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 MLF1P58340 268 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 ZNF90Q03938 601 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 OR4C5Q8NGB2 326 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 TMEM147Q9BVK8 224 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 BET1LQ9NYM9 111 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 RBFOX2O43251 390 aaKnown RBP eCLIP20.62■□□□□ 0.89
SOX1-201ENST00000330949 FAM103A1Q9BTL3 118 aaKnown RBP20.62■□□□□ 0.89
SOX1-201ENST00000330949 KCNIP2Q9NS61 270 aa20.62■□□□□ 0.89
SOX1-201ENST00000330949 PLA2G5P39877 138 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 BATF2Q8N1L9 274 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 RNF138Q8WVD3 245 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 NCOR1P1Q9H4R4 102 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 IGHV2-70DA0A0C4DH43 119 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 FAM90A26D6RGX4 464 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 IGKV1-5P01602 117 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 EGR1P18146 543 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 FAM27BQ5VT28 67 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 MCEMP1Q8IX19 187 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 PIGCQ92535 297 aa20.61■□□□□ 0.89
SOX1-201ENST00000330949 IGLV3-32A0A0A0MS00 114 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 IGHV2OR16-5A0A0B4J2B6 119 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 LILRA5A6NI73 299 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 DEGS1O15121 323 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 BMP5P22003 454 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 TCTEX1D1Q8N7M0 179 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 Q8NFD4 153 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 OR10G8Q8NGN5 311 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 FAM122AQ96E09 287 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 MRPS16Q9Y3D3 137 aaKnown RBP20.6■□□□□ 0.89
SOX1-201ENST00000330949 ZNF253O75346 499 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 CLDN1O95832 211 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 CRYAAP02489 173 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 FKBP2P26885 142 aaKnown RBP20.6■□□□□ 0.89
SOX1-201ENST00000330949 FBLN7Q53RD9 439 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 PCSK4Q6UW60 755 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 ZDHHC23Q8IYP9 409 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 ZNF114Q8NC26 417 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 SMRP1Q8NCR6 262 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 DERL1Q9BUN8 251 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 HSPB7Q9UBY9 170 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 TBL2Q9Y4P3 447 aaKnown RBP20.6■□□□□ 0.89
SOX1-201ENST00000330949 RNF114Q9Y508 228 aa20.6■□□□□ 0.89
SOX1-201ENST00000330949 A0A1W2PR80 420 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 SYNGR3O43761 229 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 TIMP3P35625 211 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 METTL7AQ9H8H3 244 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 FGF21Q9NSA1 209 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 SLC35D1Q9NTN3 355 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 FCN1O00602 326 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 CDC34P49427 236 aaPredicted RBP20.59■□□□□ 0.89
SOX1-201ENST00000330949 UNQ5815/PRO19632Q6UWF5 114 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 GCNT2Q8N0V5 402 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 PGPEP1LA6NFU8 196 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 IGFBP4P22692 258 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 ZNF324BQ6AW86 544 aaPredicted RBP20.59■□□□□ 0.89
SOX1-201ENST00000330949 OR1F12Q8NHA8 337 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 LRFN3Q9BTN0 628 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 ULBP2Q9BZM5 246 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 NRN1Q9NPD7 142 aa20.59■□□□□ 0.89
SOX1-201ENST00000330949 ZNF816-ZNF321PA0A0X1KG74 233 aa20.58■□□□□ 0.89
SOX1-201ENST00000330949 CLDN23Q96B33 292 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms