RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 WASF3Q9UPY6 502 aa12.15□□□□□ -0.46
TPM3-206ENST00000330188 A0A1W2PPH5 198 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 LRRC30A6NM36 301 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 LINC00473A8K010 186 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 DEFB108AA8MXU0 73 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 SPINT2O43291 252 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 CLDN14O95500 239 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 MT-ND4LP03901 98 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 FBP1P09467 338 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 HTD2P86397 168 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 SLC38A11Q08AI6 406 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 HABP2Q14520 560 aaPredicted RBP12.14□□□□□ -0.47
TPM3-206ENST00000330188 RTP5Q14D33 572 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 ZNF726P1Q15940 193 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 RNF212Q495C1 297 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 ALKBH2Q6NS38 261 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 LINC00518Q8N0U6 118 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 TCTEX1D1Q8N7M0 179 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 UNKLQ9H9P5 680 aaKnown RBP12.14□□□□□ -0.47
TPM3-206ENST00000330188 CACNA1DQ01668 2161 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 DMXL1Q9Y485 3027 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 USF3Q68DE3 2245 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 A0A1W2PPE2 198 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 RAB29O14966 203 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 IGHV3-13P01766 116 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 ADH4P08319 380 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 CFHR2P36980 270 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 Q3ZCU0 254 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 SPRNQ5BIV9 151 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 C1orf185Q5T7R7 199 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 AGMATQ9BSE5 352 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.14□□□□□ -0.47
TPM3-206ENST00000330188 PSG11Q9UQ72 335 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 SVILO95425 2214 aa12.14□□□□□ -0.47
TPM3-206ENST00000330188 LOC102723971A0A1B0GUV8 181 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 ARG1P05089 322 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 PTAFRP25105 342 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 LINC00205P59089 165 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 SERF2P84101 59 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 TCF15Q12870 199 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 KHDC3LQ587J8 217 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 OR8G2PQ6IF36 304 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 SSX7Q7RTT5 188 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 FAM90A1Q86YD7 464 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 GCSAMQ8N6F7 178 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 TAF15Q92804 592 aaKnown RBP eCLIP12.13□□□□□ -0.47
TPM3-206ENST00000330188 HSD17B10Q99714 261 aaKnown RBP12.13□□□□□ -0.47
TPM3-206ENST00000330188 CLN8Q9UBY8 286 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 UBE2L5PA0A1B0GUS4 154 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 H3BQ15 152 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 CEBPGP53567 150 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 LTC4SQ16873 150 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 EIF2S3LQ2VIR3 472 aaKnown RBP12.13□□□□□ -0.47
TPM3-206ENST00000330188 RBMXL3Q8N7X1 1067 aaKnown RBP12.13□□□□□ -0.47
TPM3-206ENST00000330188 MEGF10Q96KG7 1140 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 SNX22Q96L94 193 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 OR2V2Q96R30 315 aa12.13□□□□□ -0.47
TPM3-206ENST00000330188 SEBOXQ9HB31 216 aaPredicted RBP12.13□□□□□ -0.47
TPM3-206ENST00000330188 IGHV3OR15-7A0A075B7D8 119 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 K7EM74 188 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 TM4SF5O14894 197 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 GLRXP35754 106 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 HOXA1P49639 335 aaPredicted RBP12.12□□□□□ -0.47
TPM3-206ENST00000330188 RAB5BP61020 215 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 RPS23P62266 143 aaKnown RBP12.12□□□□□ -0.47
TPM3-206ENST00000330188 NKX6-1P78426 367 aaPredicted RBP12.12□□□□□ -0.47
TPM3-206ENST00000330188 C3orf36Q3SXR2 165 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 ZNF787Q6DD87 383 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 H2BFWTQ7Z2G1 175 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 RCC1LQ96I51 464 aaKnown RBP12.12□□□□□ -0.47
TPM3-206ENST00000330188 GNG13Q9P2W3 67 aa12.12□□□□□ -0.47
TPM3-206ENST00000330188 CNOT1A5YKK6 2376 aaKnown RBP12.12□□□□□ -0.47
TPM3-206ENST00000330188 PMS2P5A8MQ11 134 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 C1orf196B1AJZ1 125 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 MGST3O14880 152 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 ZG16O60844 167 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 CRYAAP02489 173 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 TIMP3P35625 211 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 KLF3P57682 345 aaPredicted RBP12.11□□□□□ -0.47
TPM3-206ENST00000330188 CR1LQ2VPA4 569 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 TMEM41BQ5BJD5 291 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 ZNF429Q86V71 674 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 MOGAT3Q86VF5 341 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 FAM24BQ8N5W8 94 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 DTD1Q8TEA8 209 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 ZDHHC16Q969W1 377 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 RAB39BQ96DA2 213 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 LAMP3Q9UQV4 416 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 DSPP15924 2871 aaKnown RBP12.11□□□□□ -0.47
TPM3-206ENST00000330188 PROP1O75360 226 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 CD55P08174 381 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 GZMHP20718 246 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 RPL35P42766 123 aaKnown RBP12.11□□□□□ -0.47
TPM3-206ENST00000330188 MORN2Q502X0 79 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 NCR3LG1Q68D85 454 aa12.11□□□□□ -0.47
TPM3-206ENST00000330188 VHLLQ6RSH7 139 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms