RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 HIST1H1BP16401 226 aaKnown RBP9.77□□□□□ -0.85
COL4A5-201ENST00000328300 OVCH2Q7RTZ1 564 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 MS4A10Q96PG2 267 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 RPL29P47914 159 aaKnown RBP9.77□□□□□ -0.85
COL4A5-201ENST00000328300 CHAC2Q8WUX2 184 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 NOL4LQ96MY1 436 aaPredicted RBP9.77□□□□□ -0.85
COL4A5-201ENST00000328300 HDHD3Q9BSH5 251 aaPredicted RBP9.77□□□□□ -0.85
COL4A5-201ENST00000328300 SLC25A22Q9H936 323 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 TANC1Q9C0D5 1861 aa9.77□□□□□ -0.85
COL4A5-201ENST00000328300 CD1BP29016 333 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 RPL13AP40429 203 aaKnown RBP9.76□□□□□ -0.85
COL4A5-201ENST00000328300 ACP7Q6ZNF0 438 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 SEC11CQ9BY50 192 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 ORM2P19652 201 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 ZNF273Q14593 569 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 OR4X1Q8NH49 305 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 CCL19Q99731 98 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 COL4A6Q14031 1691 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 LOC102723971A0A1B0GUV8 181 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 HSPE1P61604 102 aaKnown RBP9.76□□□□□ -0.85
COL4A5-201ENST00000328300 PCGF1Q9BSM1 259 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 OR4C13Q8NGP0 309 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 TMEM106BQ9NUM4 274 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 HYPMO75409 117 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 PGA5P0DJD9 388 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 CCKARP32238 428 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 PMS2P11Q13670 270 aa9.76□□□□□ -0.85
COL4A5-201ENST00000328300 FNDC1Q4ZHG4 1894 aaPredicted RBP9.76□□□□□ -0.85
COL4A5-201ENST00000328300 ELOA3CA0A087WX78 387 aaPredicted RBP9.75□□□□□ -0.85
COL4A5-201ENST00000328300 SMIM6P0DI80 62 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 GOLT1BQ9Y3E0 138 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 FAM74A7A6NL05 159 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 C11orf94C9JXX5 98 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 NEURL1O76050 574 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 ZNF146Q15072 292 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 PEAR1Q5VY43 1037 aaPredicted RBP9.75□□□□□ -0.85
COL4A5-201ENST00000328300 OR4A5Q8NH83 315 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 DYRK2Q92630 601 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 P2RX4Q99571 388 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 CELA3AP09093 270 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 SCTP09683 121 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 FAM78BQ5VT40 261 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 RSRP1Q9BUV0 290 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 OR2A4O95047 310 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 IGFBP3P17936 291 aaPredicted RBP9.75□□□□□ -0.85
COL4A5-201ENST00000328300 IGHV1-2P23083 117 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 BSXQ3C1V8 233 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 VWA1Q6PCB0 445 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 SELENOHQ8IZQ5 122 aaKnown RBP9.75□□□□□ -0.85
COL4A5-201ENST00000328300 OR2A7Q96R45 310 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 NPAS1Q99742 590 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 LINC00862A6NCI5 91 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 M0R143 59 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 VSIG10L2P0DP72 767 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 ATP5J2P56134 94 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 OSR1Q8TAX0 266 aaPredicted RBP9.75□□□□□ -0.85
COL4A5-201ENST00000328300 SMIM8Q96KF7 97 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 TMEM218A2RU14 115 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 FAM157AC9JC47 383 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 AQP10Q96PS8 301 aa9.75□□□□□ -0.85
COL4A5-201ENST00000328300 RCC2Q9P258 522 aaKnown RBP9.75□□□□□ -0.85
COL4A5-201ENST00000328300 METTL1Q9UBP6 276 aaKnown RBP9.75□□□□□ -0.85
COL4A5-201ENST00000328300 ZNF250P15622 560 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 RHOVQ96L33 236 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 NAT8BQ9UHF3 227 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 ZNF716A6NP11 495 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 PSG5Q15238 335 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 SPNS3Q6ZMD2 512 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 ZNF826PQ6ZT77 177 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 ABHD12Q8N2K0 398 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 A0A087X0M5 115 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 A0A1B0GX30 115 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 OR2T8A6NH00 312 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 CXCL3P19876 107 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 SMAGPQ0VAQ4 97 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 SPACA3Q8IXA5 215 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 OR2T10Q8NGZ9 312 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 ZNF430Q9H8G1 570 aaPredicted RBP9.74□□□□□ -0.85
COL4A5-201ENST00000328300 TUBD1Q9UJT1 453 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 RPS11P62280 158 aaKnown RBP eCLIP9.74□□□□□ -0.85
COL4A5-201ENST00000328300 OR8I2Q8N0Y5 310 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 PQLC2LA1A4F0 135 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 ZNF205O95201 554 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 RIGQ13278 110 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 NCMAPQ5T1S8 102 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 C11orf42Q8N5U0 333 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 OR4P4Q8NGL7 312 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 AKIRIN1Q9H9L7 192 aaPredicted RBP9.74□□□□□ -0.85
COL4A5-201ENST00000328300 NEUROG3Q9Y4Z2 214 aa9.74□□□□□ -0.85
COL4A5-201ENST00000328300 DOCK6Q96HP0 2047 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 A0A0G2JMM0 328 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 A0A1W2PPB8 328 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 A0A1W2PRS3 328 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 KIR3DP1A8MWS1 328 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 ATXN7O15265 892 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-201ENST00000328300 GDF9O60383 454 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 CYB5R3P00387 301 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-201ENST00000328300 C19orf57Q0VDD7 668 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms