RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 TMEM204Q9BSN7 226 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 REG4Q9BYZ8 158 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 LYRM2Q9NU23 88 aaPredicted RBP12.35□□□□□ -0.43
TPM3-205ENST00000328159 SLC25A10Q9UBX3 287 aaPredicted RBP12.35□□□□□ -0.43
TPM3-205ENST00000328159 IGHV1-69-2A0A0G2JMI3 117 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 hADV38S2A0JD32 116 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 IGSF23A1L1A6 192 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 LINC00473A8K010 186 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 ITGB1BP1O14713 200 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 TNFRSF13BO14836 293 aaPredicted RBP12.35□□□□□ -0.43
TPM3-205ENST00000328159 CAV2P51636 162 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 ZNF134P52741 427 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 BRWD1-AS2P59051 145 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 EWSR1Q01844 656 aaKnown RBP eCLIP12.35□□□□□ -0.43
TPM3-205ENST00000328159 LRRC20Q8TCA0 184 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 IFI27L2Q9H2X8 130 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 LINC00574Q9H8X3 128 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 IDI2-AS1Q9NZ38 188 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 MMP24Q9Y5R2 645 aa12.35□□□□□ -0.43
TPM3-205ENST00000328159 TPRP12270 2363 aaKnown RBP12.34□□□□□ -0.43
TPM3-205ENST00000328159 PKD1L2Q7Z442 2459 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 MFSD2BA6NFX1 497 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 B8ZZF3 427 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 FGF16O43320 207 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 CHST1O43916 411 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 ATG12O94817 140 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 S1PR2O95136 353 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 TMEM50AO95807 157 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 IGHV3-7P01780 117 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 NHLH2Q02577 135 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 TMEM30BQ3MIR4 351 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 WFDC1Q9HC57 220 aa12.34□□□□□ -0.43
TPM3-205ENST00000328159 BORCS7-ASMTA0A0B4J1R7 106 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 SLC31A2O15432 143 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 PROP1O75360 226 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 DUTP33316 252 aaKnown RBP12.33□□□□□ -0.44
TPM3-205ENST00000328159 RAB7AP51149 207 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 PAX9P55771 341 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 MEF2CQ06413 473 aaPredicted RBP12.33□□□□□ -0.44
TPM3-205ENST00000328159 UTF1Q5T230 341 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 EIF5AL1Q6IS14 154 aaKnown RBP12.33□□□□□ -0.44
TPM3-205ENST00000328159 LYPD2Q6UXB3 125 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 UBAC2Q8NBM4 344 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 LEAP2Q969E1 77 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 BARX1Q9HBU1 254 aaPredicted RBP12.33□□□□□ -0.44
TPM3-205ENST00000328159 LINC00312Q9Y6C7 94 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 TEX46H3BTG2 121 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 I3L521 148 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 M0R1X1 148 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 NDUFB3O43676 98 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 FCN3O75636 299 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 P0C879 139 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 NFYBP25208 207 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 G6PCP35575 357 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 LINC00205P59089 165 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 CT45A1Q5HYN5 189 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 NCR3LG1Q68D85 454 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 TMEM252Q8N6L7 170 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 CT45A3Q8NHU0 189 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 CD300LFQ8TDQ1 290 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 ARV1Q9H2C2 271 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 C19orf12Q9NSK7 152 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 COA4Q9NYJ1 87 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 TAS2R3Q9NYW6 316 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 GAB2Q9UQC2 676 aa12.33□□□□□ -0.44
TPM3-205ENST00000328159 HIVEP3Q5T1R4 2406 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 YLPM1P49750 1951 aaKnown RBP12.32□□□□□ -0.44
TPM3-205ENST00000328159 KRASP01116 189 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 FAM157CP0CG43 387 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 HFEQ30201 348 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 RPL39P5Q59GN2 51 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 PRAMEF5Q5TYX0 476 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 ZNF295-AS1Q8N0V1 137 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 ZNF439Q8NDP4 499 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 FAM122AQ96E09 287 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 LAMP3Q9UQV4 416 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 ITPR1Q14643 2758 aa12.32□□□□□ -0.44
TPM3-205ENST00000328159 SYNGR2O43760 224 aa12.31□□□□□ -0.44
TPM3-205ENST00000328159 RPL23AP62750 156 aaKnown RBP12.31□□□□□ -0.44
TPM3-205ENST00000328159 RPL31P62899 125 aaKnown RBP12.31□□□□□ -0.44
TPM3-205ENST00000328159 ZNF273Q14593 569 aa12.31□□□□□ -0.44
TPM3-205ENST00000328159 C4orf17Q53FE4 359 aa12.31□□□□□ -0.44
TPM3-205ENST00000328159 LRRC10Q5BKY1 277 aa12.31□□□□□ -0.44
TPM3-205ENST00000328159 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
TPM3-205ENST00000328159 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
TPM3-205ENST00000328159 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
TPM3-205ENST00000328159 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
TPM3-205ENST00000328159 GAL3ST2Q9H3Q3 398 aa12.31□□□□□ -0.44
TPM3-205ENST00000328159 KAAG1Q9UBP8 84 aa12.31□□□□□ -0.44
TPM3-205ENST00000328159 RPUSD1Q9UJJ7 312 aaKnown RBP12.31□□□□□ -0.44
TPM3-205ENST00000328159 A0A1W2PPE3 182 aa12.3□□□□□ -0.44
TPM3-205ENST00000328159 FAM90A26D6RGX4 464 aa12.3□□□□□ -0.44
TPM3-205ENST00000328159 TOR1AO14656 332 aa12.3□□□□□ -0.44
TPM3-205ENST00000328159 RAB29O14966 203 aa12.3□□□□□ -0.44
TPM3-205ENST00000328159 NDUFA2O43678 99 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms