RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ATRAIDQ6UW56 229 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 CACFD1Q9UGQ2 172 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 A0A0B4J293 547 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 ZNF79Q15937 498 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 OPN3Q9H1Y3 402 aaPredicted RBP6.9□□□□□ -1.31
CIITA-201ENST00000324288 OR51B2Q9Y5P1 312 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 PDE6DO43924 150 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 ROM1Q03395 351 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 CBLN3Q6UW01 205 aa6.9□□□□□ -1.31
CIITA-201ENST00000324288 IGHV3-72A0A0B4J1Y9 119 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 TMEM238LA0A1B0GVL6 79 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 A1L4Q6 167 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 A6NJY4 79 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 CKS1BP61024 79 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 Q5BKY6 102 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 UBALD2Q8IYN6 164 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 VSTM2LQ96N03 204 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 OGG1O15527 345 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 CKS2P33552 79 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 MEGF9Q9H1U4 602 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 OR2W1Q9Y3N9 320 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 HYPMO75409 117 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 LGALS3P17931 250 aaKnown RBP6.89□□□□□ -1.31
CIITA-201ENST00000324288 IRF3Q14653 427 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 TRIP6Q15654 476 aaKnown RBP6.89□□□□□ -1.31
CIITA-201ENST00000324288 HCP5Q6MZN7 132 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 ZNF519Q8TB69 540 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 TMEM160Q9NX00 188 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 PPP1R17O96001 155 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 IGLV3-27P01718 113 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 IGHV3-48P01763 117 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 FCGR3AP08637 254 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 KCNMB1Q16558 191 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 SFTA2Q6UW10 78 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 OR4B1Q8NGF8 309 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 ZNF488Q96MN9 340 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 ATXN7O15265 892 aaPredicted RBP6.89□□□□□ -1.31
CIITA-201ENST00000324288 MBNL2Q5VZF2 373 aaKnown RBP6.89□□□□□ -1.31
CIITA-201ENST00000324288 GPHA2Q96T91 129 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 METTL1Q9UBP6 276 aaKnown RBP6.89□□□□□ -1.31
CIITA-201ENST00000324288 HIGD1AQ9Y241 93 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 CLDN16Q9Y5I7 305 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.89□□□□□ -1.31
CIITA-201ENST00000324288 HAX1O00165 279 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 CDS2O95674 445 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 TYMSP04818 313 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 LILRA5A6NI73 299 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 PPP1CCP36873 323 aaKnown RBP6.89□□□□□ -1.31
CIITA-201ENST00000324288 ZNF665Q9H7R5 613 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 ARL14EPLP0DKL9 152 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 EGR1P18146 543 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 RAB1CQ92928 201 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 UCN2Q96RP3 112 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 ZFP64Q9NPA5 681 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 FOLR2P14207 255 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 IFITM2Q01629 132 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 COX19Q49B96 90 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 OR1L8Q8NGR8 309 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
CIITA-201ENST00000324288 ADAMTSL1Q8N6G6 1762 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 SSTR5P35346 364 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 MMDQ15546 238 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 HOXD4P09016 255 aaPredicted RBP6.88□□□□□ -1.31
CIITA-201ENST00000324288 ZNF324BQ6AW86 544 aaPredicted RBP6.88□□□□□ -1.31
CIITA-201ENST00000324288 LINC00469Q8N7U9 141 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 NUBP1P53384 320 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 GGTLC2Q14390 218 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 ZNF362Q5T0B9 420 aaPredicted RBP6.88□□□□□ -1.31
CIITA-201ENST00000324288 TLNRD1Q9H1K6 362 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 DMRT1Q9Y5R6 373 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 KCNMB2Q9Y691 235 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 ZNF236Q9UL36 1845 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 RBKSQ9H477 322 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 HBZP02008 142 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 MIC13Q5XKP0 118 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 MRPL16Q9NX20 251 aaKnown RBP6.88□□□□□ -1.31
CIITA-201ENST00000324288 CA1P00915 261 aaPredicted RBP6.88□□□□□ -1.31
CIITA-201ENST00000324288 SMIM13P0DJ93 91 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 PRICKLE4Q2TBC4 344 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 ZNF414Q96IQ9 312 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 TRBV5-4A0A0C4DH59 114 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 LOXL3P58215 753 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 ZNF441Q8N8Z8 693 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 HMGCLL1Q8TB92 370 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 HIST1H2BAQ96A08 127 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 SPSB2Q99619 263 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 NMBP08949 121 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 CEACAM3P40198 252 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 RAXQ9Y2V3 346 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 A0A1B0GU03 582 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 PPYP01298 95 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 TEX30Q5JUR7 227 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 TPRX1Q8N7U7 411 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 GHITMQ9H3K2 345 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 KLHDC2Q9Y2U9 406 aa6.88□□□□□ -1.31
CIITA-201ENST00000324288 ABCA3Q99758 1704 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 ZIC3O60481 467 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 PRR35P0CG20 571 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 FUT5Q11128 374 aa6.87□□□□□ -1.31
CIITA-201ENST00000324288 TUBD1Q9UJT1 453 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms