RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ATXN7O15265 892 aaPredicted RBP6.3□□□□□ -1.4
IFT88-201ENST00000319980 CLDN1O95832 211 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 TSPAN15O95858 294 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 CYB5R3P00387 301 aaPredicted RBP6.3□□□□□ -1.4
IFT88-201ENST00000319980 ADH4P08319 380 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 ATP6V0CP27449 155 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 BSPH1Q075Z2 132 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 BAXQ07812 192 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 CATR1Q13166 79 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 MIDNQ504T8 468 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 STX12Q86Y82 276 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 TGIF2LYQ8IUE0 185 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 RAB40CQ96S21 281 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 RNF7Q9UBF6 113 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 CACFD1Q9UGQ2 172 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 ZNF835Q9Y2P0 537 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 CHD3Q12873 2000 aaKnown RBP6.3□□□□□ -1.4
IFT88-201ENST00000319980 A0A1B0GV50 99 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 RNASEK-C17orf49H0YIS7 233 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 OR4A8P0C604 315 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 TNFSF4P23510 183 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 GATA4P43694 442 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 BRWD1-AS2P59051 145 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 HTD2P86397 168 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 PAX5Q02548 391 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 TMEM267Q0VDI3 215 aaPredicted RBP6.3□□□□□ -1.4
IFT88-201ENST00000319980 GUCA2BQ16661 112 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 Q3ZCU0 254 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 ADAM5Q6NVV9 412 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 TRAT1Q6PIZ9 186 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 DUX4L9Q6RFH8 374 aaPredicted RBP6.3□□□□□ -1.4
IFT88-201ENST00000319980 ZNF295-AS1Q8N0V1 137 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 TOLLIPQ9H0E2 274 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 WSB1Q9Y6I7 421 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 ZZEF1O43149 2961 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 KALRNO60229 2985 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 USP24Q9UPU5 2620 aa6.3□□□□□ -1.4
IFT88-201ENST00000319980 LINC00473A8K010 186 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 TXNL1O43396 289 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 S1PR2O95136 353 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 THBDP07204 575 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 METTL15P1P0C7V9 234 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 RUNX1Q01196 453 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 EIF4EBP1Q13541 118 aaPredicted RBP6.29□□□□□ -1.4
IFT88-201ENST00000319980 MORN2Q502X0 79 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 NUP37Q8NFH4 326 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 LYPD6BQ8NI32 183 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 FAM213BQ8TBF2 198 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 RND1Q92730 232 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 KCNJ16Q9NPI9 418 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 DCAF16Q9NXF7 216 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 PSENENQ9NZ42 101 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 RAXQ9Y2V3 346 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 MMP24Q9Y5R2 645 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 USF3Q68DE3 2245 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 DIDO1Q9BTC0 2240 aaKnown RBP6.29□□□□□ -1.4
IFT88-201ENST00000319980 TOR1AO14656 332 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 SULT1A1P50225 295 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 RAB5CP51148 216 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 RBPJQ06330 500 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 ODF1Q14990 250 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 ADIPOQQ15848 244 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 SPANXN5Q5MJ07 72 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 PUSL1Q8N0Z8 303 aaKnown RBP6.29□□□□□ -1.4
IFT88-201ENST00000319980 SVBPQ8N300 66 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 EDARADDQ8WWZ3 215 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 NKX6-2Q9C056 277 aaPredicted RBP6.29□□□□□ -1.4
IFT88-201ENST00000319980 C19orf12Q9NSK7 152 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 NBASA2RRP1 2371 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 TRGV8A0A0C4DH27 118 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 C9JQL5 133 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 EREGO14944 169 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 PROP1O75360 226 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 RBMXL2O75526 392 aaKnown RBP6.29□□□□□ -1.4
IFT88-201ENST00000319980 GPR12P47775 334 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 TMPRSS3P57727 454 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 UBE2KP61086 200 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 SLC25A24Q6NUK1 477 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 CCL13Q99616 98 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 ATP5SQ99766 215 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 ABHD14AQ9BUJ0 271 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 FAM234AQ9H0X4 552 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 OR6C3Q9NZP0 311 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 JKAMPQ9P055 326 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 PKDREJQ9NTG1 2253 aa6.29□□□□□ -1.4
IFT88-201ENST00000319980 GYPAP02724 150 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 CD5P06127 495 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 SFTA3P0C7M3 94 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 IRF2P14316 349 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 ZNF134P52741 427 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 DVL1P1P54792 670 aaPredicted RBP6.28□□□□□ -1.4
IFT88-201ENST00000319980 LOXL3P58215 753 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 MSMO1Q15800 293 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 UTF1Q5T230 341 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 NCR3LG1Q68D85 454 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 ZNF561Q8N587 486 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 LEAP2Q969E1 77 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 WFIKKN1Q96NZ8 548 aa6.28□□□□□ -1.4
IFT88-201ENST00000319980 HSD17B10Q99714 261 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms