RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 HSD17B13Q7Z5P4 300 aaPredicted RBP7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 OR4D10Q8NGI6 311 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 EEF1AKMT3Q96AZ1 226 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 Q9UFV3 132 aa7.25□□□□□ -1.25
PDLIM5-201ENST00000317968 TRAV30A0A087WSZ9 112 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 CFHR2P36980 270 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 RAB9AP51151 201 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 RELQ04864 619 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF146Q15072 292 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 RPEL1Q2QD12 228 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 Q5PR19 223 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 TMEM217Q8N7C4 229 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 METTL26Q96S19 204 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 MTCH1Q9NZJ7 389 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 RABAC1Q9UI14 185 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 CDC42EP3Q9UKI2 254 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 A6NNC1 897 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 TOXO94900 526 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 PTHLHP12272 177 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 ATP6V1FQ16864 119 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 RRN3P1Q2M238 152 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 Q8NFD4 153 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 RAB40CQ96S21 281 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 C19orf12Q9NSK7 152 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 JPT1Q9UK76 154 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 OR2A4O95047 310 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 ORM1P02763 201 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 QRFPP83859 136 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 AARDQ4LEZ3 155 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF66Q6ZN08 573 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 ACP7Q6ZNF0 438 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 PAQR4Q8N4S7 273 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 GVQW1Q8N7I0 195 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 OR2A7Q96R45 310 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 SH3BGRL3Q9H299 93 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 KCNK15Q9H427 330 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 TMEM165Q9HC07 324 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 OR7C2O60412 319 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 SPP1P10451 314 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 RND3P61587 244 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 PPP1R1AQ13522 171 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 MOGAT2Q3SYC2 334 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 ASPHD2Q6ICH7 369 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 LIAT1Q6ZQX7 453 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 C8orf46Q8TAG6 207 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 METTL1Q9UBP6 276 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 FLVCR2Q9UPI3 526 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 CGAP01215 116 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 PPOXP50336 477 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 TMEM50BP56557 158 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 OR5I1Q13606 314 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 OPCMLQ14982 345 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 GUSBP1Q15486 140 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 PNKDQ8N490 385 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 DOCK10Q96BY6 2186 aa7.24□□□□□ -1.25
PDLIM5-201ENST00000317968 NXPH3O95157 252 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 RPL27AP46776 148 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 FBXL19-AS1Q494R0 122 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 FAAP20Q6NZ36 180 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 DPM3Q9P2X0 92 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 A0A1W2PP11 408 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 SRRM5B3KS81 715 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 SNCGO76070 127 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 MGST1P10620 155 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 AESQ08117 197 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF324BQ6AW86 544 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 LFNGQ8NES3 379 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 OR10A7Q8NGE5 316 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 PCNPQ8WW12 178 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 CHST1O43916 411 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 SSSCA1O60232 199 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 CFDP00746 253 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 NUTF2P61970 127 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 GAMTQ14353 236 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 RSPO1Q2MKA7 263 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 SMCO4Q9NRQ5 59 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 C3orf85A0A1B0GTC6 90 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 ODAMA1E959 279 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 HSBP1L1C9JCN9 74 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 JTBO76095 146 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 VSIG10L2P0DP72 767 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 GATA4P43694 442 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 CNN1P51911 297 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 P2RX3P56373 397 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 CLINT1Q14677 625 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 ZNF674Q2M3X9 581 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 SAMD13Q5VXD3 122 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 MAFIPQ8WZ33 124 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 RCC2Q9P258 522 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 CHD9Q3L8U1 2897 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 IAPPP10997 89 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 SLC25A6P12236 298 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 MMP9P14780 707 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 AKR1C3P42330 323 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 LYZP61626 148 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 PLAC9Q5JTB6 97 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 GALNT14Q96FL9 552 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 SLC2A9Q9NRM0 540 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 CALYQ9NYX4 217 aa7.23□□□□□ -1.25
PDLIM5-201ENST00000317968 MED13Q9UHV7 2174 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms