RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 HOXD3P31249 432 aaPredicted RBP12.17□□□□□ -0.46
FOXR1-201ENST00000317011 GNMTQ14749 295 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 UBE2NLQ5JXB2 153 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 ZNF833PQ6ZTB9 187 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 PRR18Q8N4B5 295 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 KLHL30-AS1Q8NEE0 82 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 NABP2Q9BQ15 211 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
FOXR1-201ENST00000317011 FAAP24Q9BTP7 215 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 ABHD14AQ9BUJ0 271 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 ATG5Q9H1Y0 275 aa12.17□□□□□ -0.46
FOXR1-201ENST00000317011 A0A0A6YYD4 124 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 TRBV6-6A0A0A6YYG2 114 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 RGS5O15539 181 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 PPP1CCP36873 323 aaKnown RBP12.16□□□□□ -0.46
FOXR1-201ENST00000317011 VEGFCP49767 419 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
FOXR1-201ENST00000317011 NKAPLQ5M9Q1 402 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 FAM89BQ8N5H3 189 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 NPBQ8NG41 125 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 PTX4Q96A99 478 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 GALMQ96C23 342 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 NEDD4LQ96PU5 975 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 ZNF251Q9BRH9 671 aa12.16□□□□□ -0.46
FOXR1-201ENST00000317011 A0A075B6Q4 140 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 METTL21EPA6NDL7 271 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 NUDT19A8MXV4 375 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 CTDSP2O14595 271 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 ITGB1BP1O14713 200 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 SOCS1O15524 211 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 EIF4EP06730 217 aaKnown RBP12.15□□□□□ -0.46
FOXR1-201ENST00000317011 MOGAT2Q3SYC2 334 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 LCNL1Q6ZST4 164 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 C6orf201Q7Z4U5 140 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 LAX1Q8IWV1 398 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 OR56B1Q8NGI3 324 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 AGMATQ9BSE5 352 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 NXF2Q9GZY0 626 aaKnown RBP12.15□□□□□ -0.46
FOXR1-201ENST00000317011 COL7A1Q02388 2944 aa12.15□□□□□ -0.46
FOXR1-201ENST00000317011 KMT2CQ8NEZ4 4911 aaKnown RBP12.14□□□□□ -0.47
FOXR1-201ENST00000317011 FOXI3A8MTJ6 420 aaPredicted RBP12.14□□□□□ -0.47
FOXR1-201ENST00000317011 FAM25AB3EWG3 89 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 FAM25CB3EWG5 89 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 FAM25GB3EWG6 89 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 RGS11O94810 467 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 NDUFA3O95167 84 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 IGLV1-40P01703 118 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 HLA-DRB1P01911 266 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 ELK1P19419 428 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 BLVRBP30043 206 aaPredicted RBP12.14□□□□□ -0.47
FOXR1-201ENST00000317011 ACTBP60709 375 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 FHL3Q13643 280 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 DEFB121Q5J5C9 76 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 FAM71F2Q6NXP2 309 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 OR8U1Q8NH10 309 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 DUX3Q96PT4 197 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 MRPL20Q9BYC9 149 aaKnown RBP12.14□□□□□ -0.47
FOXR1-201ENST00000317011 MIXL1Q9H2W2 232 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 IFI27L2Q9H2X8 130 aa12.14□□□□□ -0.47
FOXR1-201ENST00000317011 ZMAT5Q9UDW3 170 aaKnown RBP12.14□□□□□ -0.47
FOXR1-201ENST00000317011 ZNF107Q9UII5 783 aaPredicted RBP12.14□□□□□ -0.47
FOXR1-201ENST00000317011 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 APOA1P02647 267 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 OR5H8P0DN80 308 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 VDAC1P21796 283 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 CNTFRP26992 372 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 OR3A3P47888 321 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 TMEM50BP56557 158 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 RUNX1Q01196 453 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 VAX1Q5SQQ9 334 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 MINDY2Q8NBR6 621 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 OR10R2Q8NGX6 335 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 C4orf3Q8WVX3 66 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 KLK15Q9H2R5 256 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 OR51J1Q9H342 316 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 GHITMQ9H3K2 345 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
FOXR1-201ENST00000317011 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 HSF4Q9ULV5 492 aa12.13□□□□□ -0.47
FOXR1-201ENST00000317011 SAA2-SAA4A0A096LPE2 208 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 I3L521 148 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 RAB27BO00194 218 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 RAMP3O60896 148 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 PROP1O75360 226 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 SAA2P0DJI9 122 aaPredicted RBP12.12□□□□□ -0.47
FOXR1-201ENST00000317011 CT45A6P0DMU7 189 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 CT45A5P0DMU8 189 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 CT45A7P0DMV0 189 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 CRIP2P52943 208 aaPredicted RBP12.12□□□□□ -0.47
FOXR1-201ENST00000317011 MMDQ15546 238 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 C5orf64Q2M2E5 130 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 C19orf54Q5BKX5 351 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 PLAC9Q5JTB6 97 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 LIN54Q6MZP7 749 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 ZNF491Q8N8L2 437 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 DPF1Q92782 380 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 RAB3CQ96E17 227 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 S100A16Q96FQ6 103 aaKnown RBP12.12□□□□□ -0.47
FOXR1-201ENST00000317011 ARHGAP5-AS1Q96IT6 56 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 UBE2E2Q96LR5 201 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms