RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 IL22RA2Q969J5 263 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 MGST1P10620 155 aaKnown RBP11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 CCL8P80075 99 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 ZNF645Q8N7E2 425 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 COL6A6A6NMZ7 2263 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 CBY3A6NI87 242 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 F8VVB4 439 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 F8VWA3 439 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 CLDN34H7C241 214 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 CLDN14O95500 239 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 GNB1P62873 340 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 LRFN3Q9BTN0 628 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 CADP27708 2225 aa11.4□□□□□ -0.58
PCDHB9-201ENST00000316105 EIF4E3Q8N5X7 224 aaKnown RBP11.4□□□□□ -0.59
PCDHB9-201ENST00000316105 ACY3Q96HD9 319 aa11.4□□□□□ -0.59
PCDHB9-201ENST00000316105 H0YL77 283 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 EIF3GO75821 320 aaKnown RBP eCLIP11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 CSRP1P21291 193 aaKnown RBP11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 SSTR5P35346 364 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 MPV17P39210 176 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 DLK1P80370 383 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 TMEM42Q69YG0 159 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 CYB561D1Q8N8Q1 229 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 ZNF383Q8NA42 475 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 OR51M1Q9H341 326 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 DIDO1Q9BTC0 2240 aaKnown RBP11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 TMEM131Q92545 1883 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 NCOA6Q14686 2063 aaPredicted RBP11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 C16orf97H3BN30 126 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 WNT5AP41221 380 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 HES1Q14469 280 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 TMEM241Q24JQ0 296 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 STUMQ69YW2 141 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 C9orf106Q8NAJ2 232 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 GAL3ST2Q9H3Q3 398 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 PATZ1Q9HBE1 687 aaKnown RBP11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 CACNA1BQ00975 2339 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 F6UZH7 168 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 CNIH1O95406 144 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 KIR2DS2P43631 304 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 LURAP1LQ8IV03 231 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 C1orf174Q8IYL3 243 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 SAP30LQ9HAJ7 183 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 SLC35D1Q9NTN3 355 aa11.39□□□□□ -0.59
PCDHB9-201ENST00000316105 ODAMA1E959 279 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 FAM90A27PA6NNH2 459 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 G3V3Q6 166 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 OR5G3P0C626 314 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 RND3P61587 244 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 C5orf24Q7Z6I8 188 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 BTF3L4Q96K17 158 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 ZNF665Q9H7R5 613 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 DOCK10Q96BY6 2186 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 TRAV38-1A0A0B4J264 116 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 TRAV24A0A0B4J272 114 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 TAS2R45P59539 299 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 RSPO1Q2MKA7 263 aaPredicted RBP11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 H1FOOQ8IZA3 346 aaPredicted RBP11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 SPSB4Q96A44 273 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 RARRES2Q99969 163 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 RBKSQ9H477 322 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 VAX2Q9UIW0 290 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 WIPF3A6NGB9 483 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 DBX1A6NMT0 343 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 C12orf77C9JDV5 145 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 S1PR2O95136 353 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 DEFA4P12838 97 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 NTF4P34130 210 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 PLPPR1Q8TBJ4 325 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 ADTRPQ96IZ2 230 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 C18orf12Q96KH6 178 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 OR4C12Q96R67 309 aa11.38□□□□□ -0.59
PCDHB9-201ENST00000316105 TRBV6-7A0A0A0MS04 114 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 SCGB2A1O75556 95 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 RAB5AP20339 215 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 SMIM8Q96KF7 97 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 CCL13Q99616 98 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 GINS3Q9BRX5 216 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 SHANK1Q9Y566 2161 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 CDX4O14627 284 aaPredicted RBP11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 PCP4P48539 62 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 SERF2P84101 59 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 KHDC3LQ587J8 217 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 SSMEM1Q8WWF3 244 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 TIMD4Q96H15 378 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 BRCA2P51587 3418 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 IL18BPO95998 194 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 SRSF3P84103 164 aaKnown RBP11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 MRGPRGQ86SM5 289 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 LSM10Q969L4 123 aaKnown RBP11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 REG4Q9BYZ8 158 aa11.37□□□□□ -0.59
PCDHB9-201ENST00000316105 TECTAO75443 2155 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 TNFRSF9Q07011 255 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 RNF138Q8WVD3 245 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 FAM210BQ96KR6 192 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 PNRC1Q12796 327 aaPredicted RBP11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 ZNF66Q6ZN08 573 aa11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 NEIL1Q96FI4 390 aaPredicted RBP11.36□□□□□ -0.59
PCDHB9-201ENST00000316105 SNX22Q96L94 193 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms