RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 A6NJ64 397 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 TIMM23O14925 209 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 CHST1O43916 411 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 YPEL1O60688 119 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 RGS11O94810 467 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 HLA-DQB1P01920 261 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 RNASE1P07998 156 aaKnown RBP6.32□□□□□ -1.4
CDC42-201ENST00000315554 DTYMKP23919 212 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 CEACAM3P40198 252 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 KIR2DS4P43632 304 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 HNF4GQ14541 408 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 KIR2DS1Q14954 304 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 RPL39P5Q59GN2 51 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 STEAP3Q658P3 488 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 MOB3BQ86TA1 216 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 LINC00311Q8N616 119 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 DRAM1Q8N682 238 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 OR2AK2Q8NG84 335 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 OR4A4PQ8NGN8 299 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 OR56B4Q8NH76 319 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 CAPSLQ8WWF8 208 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 ABHD14BQ96IU4 210 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 YPEL2Q96QA6 119 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 C11orf54Q9H0W9 315 aaPredicted RBP6.32□□□□□ -1.4
CDC42-201ENST00000315554 IFI27L2Q9H2X8 130 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 RDH8Q9NYR8 311 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 VPREB3Q9UKI3 123 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 MGAT4AQ9UM21 535 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 POMT1Q9Y6A1 747 aa6.32□□□□□ -1.4
CDC42-201ENST00000315554 SAA2-SAA4A0A096LPE2 208 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 A0A1W2PPI3 338 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 XKRY2A2RUG3 117 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 SH2D7A6NKC9 451 aaPredicted RBP6.31□□□□□ -1.4
CDC42-201ENST00000315554 ZNF736B4DX44 427 aaPredicted RBP6.31□□□□□ -1.4
CDC42-201ENST00000315554 CLDN34H7C241 214 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 CIDEAO60543 219 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 SAA2P0DJI9 122 aaPredicted RBP6.31□□□□□ -1.4
CDC42-201ENST00000315554 NFYAP23511 347 aaPredicted RBP6.31□□□□□ -1.4
CDC42-201ENST00000315554 ZBTB25P24278 435 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 IL3RAP26951 378 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 PRSS3P35030 304 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 PITPNAQ00169 270 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 TMEM30BQ3MIR4 351 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 Q3ZCU0 254 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 CNIH2Q6PI25 160 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 HOGA1Q86XE5 327 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 ODF3L1Q8IXM7 274 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 TMEM86BQ8N661 226 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 BEST4Q8NFU0 473 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 OR5R1Q8NH85 324 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 OR10J5Q8NHC4 309 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 MCFD2Q8NI22 146 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 TMEM158Q8WZ71 300 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 SNAPC3Q92966 411 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 ST6GALNAC6Q969X2 333 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 GINS4Q9BRT9 223 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 CABLES2Q9BTV7 478 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 MRPL20Q9BYC9 149 aaKnown RBP6.31□□□□□ -1.4
CDC42-201ENST00000315554 SLIRPQ9GZT3 109 aaKnown RBP6.31□□□□□ -1.4
CDC42-201ENST00000315554 IFT46Q9NQC8 304 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 SLC35D1Q9NTN3 355 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 ANXA10Q9UJ72 324 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 TCF19Q9Y242 345 aa6.31□□□□□ -1.4
CDC42-201ENST00000315554 TRBV6-7A0A0A0MS04 114 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 IGHV1-3A0A0C4DH29 117 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 A6NDX4 124 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 IGKV1D-33P01593 117 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 IGKV1-33P01594 117 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 GAPDHP04406 335 aaKnown RBP6.3□□□□□ -1.4
CDC42-201ENST00000315554 CRYBA1P05813 215 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 OR8U9P0C7N5 309 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 LINC00205P59089 165 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 PMS2P11Q13670 270 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 HES1Q14469 280 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 THOC7Q6I9Y2 204 aaKnown RBP6.3□□□□□ -1.4
CDC42-201ENST00000315554 DHRS7BQ6IAN0 325 aaPredicted RBP6.3□□□□□ -1.4
CDC42-201ENST00000315554 GLDNQ6ZMI3 551 aaPredicted RBP6.3□□□□□ -1.4
CDC42-201ENST00000315554 Q6ZS49 121 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 TGIF2LXQ8IUE1 241 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 RNF152Q8N8N0 203 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 C8orf31Q8N9H6 132 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 OR8U1Q8NH10 309 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 RTN4IP1Q8WWV3 396 aaPredicted RBP6.3□□□□□ -1.4
CDC42-201ENST00000315554 CFHR4Q92496 578 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 DIRAS2Q96HU8 199 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 C1RLQ9NZP8 487 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 MBD2Q9UBB5 411 aa6.3□□□□□ -1.4
CDC42-201ENST00000315554 OOSP1A8MZH6 123 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 PMP2P02689 132 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 HLA-DMAP28067 261 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 BRS3P32247 399 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 ARL3P36405 182 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 GPR12P47775 334 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 RAB7AP51149 207 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 SSTP61278 116 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 DGCR2P98153 550 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 ZNF816Q0VGE8 651 aaPredicted RBP6.29□□□□□ -1.4
CDC42-201ENST00000315554 IL18Q14116 193 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 AANATQ16613 207 aa6.29□□□□□ -1.4
CDC42-201ENST00000315554 SRSF7Q16629 238 aaKnown RBP eCLIP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms