RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 M0R143 59 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 COL8A1P27658 744 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 FHITP49789 147 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 RND3P61587 244 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 GOLT1BQ9Y3E0 138 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 TRGC2P03986 189 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 ACP1P24666 158 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 GAS1P54826 345 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 RSPO4Q2I0M5 234 aaPredicted RBP11.83□□□□□ -0.52
SPAST-201ENST00000315285 OR8G5Q8NG78 346 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 CCL13Q99616 98 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 RARRES2Q99969 163 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 RASL11BQ9BPW5 248 aa11.83□□□□□ -0.52
SPAST-201ENST00000315285 TEX50A0A1B0GTY4 177 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 MSGN1A6NI15 193 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 CSN3P07498 182 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 EFNB1P98172 346 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 ELOBQ15370 118 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 IL19Q9UHD0 177 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 SIP14410 1827 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 IGSF23A1L1A6 192 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 NKX2-8O15522 239 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 NDUFB4O95168 129 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 PPP1R32Q7Z5V6 425 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 GDF15Q99988 308 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 DOCK6Q96HP0 2047 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 ZNF646O15015 1829 aaPredicted RBP11.82□□□□□ -0.52
SPAST-201ENST00000315285 PPIAL4EA0A075B759 164 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 PPIAL4DF5H284 164 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 PPIAL4FP0DN26 164 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 TP53RKQ96S44 253 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 PPIAL4AQ9Y536 164 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 MPTX1A8MV57 137 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 APELAP0DMC3 54 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 IGFBP3P17936 291 aaPredicted RBP11.82□□□□□ -0.52
SPAST-201ENST00000315285 WNT5AP41221 380 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 CD81P60033 236 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 IZUMO4Q1ZYL8 232 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 TM2D1Q9BX74 207 aa11.82□□□□□ -0.52
SPAST-201ENST00000315285 A0A087WV48 116 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 GCSAMQ8N6F7 178 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 WDR90Q96KV7 1748 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 AHRRA9YTQ3 701 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 PRR32B1ATL7 298 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 ITLN1Q8WWA0 313 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
SPAST-201ENST00000315285 KIF26BQ2KJY2 2108 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 A0A1B0GTI1 187 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 ODAMA1E959 279 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 HOXD4P09016 255 aaPredicted RBP11.81□□□□□ -0.52
SPAST-201ENST00000315285 RFPL3SP0C7P2 107 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
SPAST-201ENST00000315285 Q6ZN92 141 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 P2RX4Q99571 388 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 AKIRIN1Q9H9L7 192 aaPredicted RBP11.81□□□□□ -0.52
SPAST-201ENST00000315285 PKIAP61925 76 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 KCNMB1Q16558 191 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 C1orf185Q5T7R7 199 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 OR4C5Q8NGB2 326 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 KLF14Q8TD94 323 aaPredicted RBP11.81□□□□□ -0.52
SPAST-201ENST00000315285 POM121Q96HA1 1249 aa11.81□□□□□ -0.52
SPAST-201ENST00000315285 HIST1H1EP10412 219 aaKnown RBP11.8□□□□□ -0.52
SPAST-201ENST00000315285 LSM10Q969L4 123 aaKnown RBP11.8□□□□□ -0.52
SPAST-201ENST00000315285 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 TXNDC17Q9BRA2 123 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 OR10J1P30954 320 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 LTBRP36941 435 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 TGIF1Q15583 401 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 FAM216AQ8WUB2 273 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 hCG_38984A0A1B0GV85 526 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 LOXL4Q96JB6 756 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 IL17BQ9UHF5 180 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 ZNF714Q96N38 554 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 TMEM191AQ9H0A3 160 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 ZNF552Q9H707 407 aaPredicted RBP11.8□□□□□ -0.52
SPAST-201ENST00000315285 HEXA-AS1Q9H8Q6 139 aa11.8□□□□□ -0.52
SPAST-201ENST00000315285 ARHGEF17Q96PE2 2063 aaPredicted RBP11.8□□□□□ -0.52
SPAST-201ENST00000315285 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 SYNGR3O43761 229 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 SMPD2O60906 423 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 FAM87AP0C7U9 286 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 OR2D3Q8NGH3 330 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 RAB24Q969Q5 203 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 COA4Q9NYJ1 87 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 IL36RNQ9UBH0 155 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 MARCH11A6NNE9 402 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 A8MXK9 166 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 J3QR89 54 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 BRS3P32247 399 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 SUCLG1P53597 346 aaKnown RBP11.79□□□□□ -0.52
SPAST-201ENST00000315285 C5orf17Q8NAS9 161 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 PAXXQ9BUH6 204 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 LINC00470Q9BZP3 86 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 ZG16O60844 167 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 GOSR1O95249 250 aa11.79□□□□□ -0.52
SPAST-201ENST00000315285 SRP14P37108 136 aaKnown RBP11.79□□□□□ -0.52
SPAST-201ENST00000315285 LGALS7P47929 136 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms