RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 PKIBQ9C010 78 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 SIRT4Q9Y6E7 314 aaPredicted RBP11.55□□□□□ -0.56
RFFL-201ENST00000315249 HELZP42694 1942 aaKnown RBP11.55□□□□□ -0.56
RFFL-201ENST00000315249 IL24Q13007 206 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 ZNF429Q86V71 674 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 SLC24A4Q8NFF2 622 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 DUX5Q96PT3 197 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 WSB1Q9Y6I7 421 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 DOCK10Q96BY6 2186 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 FRMPD3Q5JV73 1810 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 TRIM77I1YAP6 450 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 PPP1R2P9O14990 202 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 GATCO43716 136 aaKnown RBP11.55□□□□□ -0.56
RFFL-201ENST00000315249 HPXP02790 462 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 THY1P04216 161 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 KCNK7Q9Y2U2 307 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 TMSB15BA0A087X1C1 80 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 IFI6P09912 130 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 B2MP61769 119 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 TMEM91Q6ZNR0 172 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 SCMH1Q96GD3 660 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 FAM206AQ9NX38 181 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 RCC2Q9P258 522 aaKnown RBP11.55□□□□□ -0.56
RFFL-201ENST00000315249 MUC6Q6W4X9 2439 aa11.55□□□□□ -0.56
RFFL-201ENST00000315249 FAM181BA6NEQ2 426 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 RNF224P0DH78 156 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 MMD2Q8IY49 270 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 VKORC1L1Q8N0U8 176 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 FADS6Q8N9I5 356 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 SSTR5P35346 364 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 A0A1B0GU03 582 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 LYNX1G3V0Z9 82 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 LYNX1P0DP58 116 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 SLC6A1P30531 599 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 GUK1Q16774 197 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 Q6ZNX1 250 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 C1orf162Q8NEQ5 155 aaPredicted RBP11.54□□□□□ -0.56
RFFL-201ENST00000315249 OR10J6PQ8NGY7 276 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 DEPPQ9NTK1 212 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 PINLYPA6NC86 204 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 SNCGO76070 127 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 PTGDSP41222 190 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 RANP62826 216 aaKnown RBP11.54□□□□□ -0.56
RFFL-201ENST00000315249 SURF2Q15527 256 aaPredicted RBP11.54□□□□□ -0.56
RFFL-201ENST00000315249 UBE2V2Q15819 145 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 PRNTQ86SH4 94 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 TMEM45BQ96B21 275 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 RHOVQ96L33 236 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 WDFY2Q96P53 400 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 IGKV3-20P01619 116 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 PRSS54Q6PEW0 395 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 HOGA1Q86XE5 327 aa11.54□□□□□ -0.56
RFFL-201ENST00000315249 COL8A1P27658 744 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 PLXNA4Q9HCM2 1894 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 KLF7O75840 302 aaPredicted RBP11.53□□□□□ -0.56
RFFL-201ENST00000315249 IGHV3-48P01763 117 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 PLAURQ03405 335 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 FXYD3Q14802 87 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 ZNF66Q6ZN08 573 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 DDB2Q92466 427 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 IGLV3-12A0A075B6K2 115 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 CPN1P15169 458 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 ANKRD55Q3KP44 614 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 NLRC5Q86WI3 1866 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 PRSS3P2Q8NHM4 247 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 TCEAL7Q9BRU2 100 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 GCM2O75603 506 aaPredicted RBP11.53□□□□□ -0.56
RFFL-201ENST00000315249 PLAUP00749 431 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 BMPR1BO00238 502 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 FCGR2BP31994 310 aaPredicted RBP11.53□□□□□ -0.56
RFFL-201ENST00000315249 C11orf44Q8N8P7 122 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 ZNF837Q96EG3 531 aaPredicted RBP11.53□□□□□ -0.56
RFFL-201ENST00000315249 ZNF426Q9BUY5 554 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 MSRB2Q9Y3D2 182 aa11.53□□□□□ -0.56
RFFL-201ENST00000315249 HYPMO75409 117 aa11.52□□□□□ -0.56
RFFL-201ENST00000315249 ISG15P05161 165 aa11.52□□□□□ -0.56
RFFL-201ENST00000315249 NHLRC2Q8NBF2 726 aa11.52□□□□□ -0.56
RFFL-201ENST00000315249 IGHV3-23P01764 117 aa11.52□□□□□ -0.56
RFFL-201ENST00000315249 CLDN18P56856 261 aa11.52□□□□□ -0.56
RFFL-201ENST00000315249 OR1L6Q8NGR2 347 aa11.52□□□□□ -0.56
RFFL-201ENST00000315249 METRNQ9UJH8 293 aa11.52□□□□□ -0.56
RFFL-201ENST00000315249 DSPPQ9NZW4 1301 aa11.52□□□□□ -0.56
RFFL-201ENST00000315249 C17orf100A8MU93 164 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 RNASEK-C17orf49H0YIS7 233 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 MFAP4P55083 255 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 TMEM88Q6PEY1 159 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 IGHMP01871 453 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 TRGV3P03979 118 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 FOXF2Q12947 444 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 KHDC3LQ587J8 217 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 OR52M1Q8NGK5 317 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 RTN4RQ9BZR6 473 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 PLXNA3P51805 1871 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 CDRT15L2A8MXV6 281 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 H0YL77 283 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 CTDSPLO15194 276 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms