RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SLC25A22Q9H936 323 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 LIN7CQ9NUP9 197 aaKnown RBP11.35□□□□□ -0.59
SKA3-202ENST00000314759 FKBP11Q9NYL4 201 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 HRASP01112 189 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 OTX2P32243 289 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 RPL29P47914 159 aaKnown RBP11.35□□□□□ -0.59
SKA3-202ENST00000314759 GNG3P63215 75 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 PPP1R32Q7Z5V6 425 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 GBGT1Q8N5D6 347 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 TMEM208Q9BTX3 173 aa11.35□□□□□ -0.59
SKA3-202ENST00000314759 MRPS18CQ9Y3D5 142 aaKnown RBP11.35□□□□□ -0.59
SKA3-202ENST00000314759 FAM186AA6NE01 2351 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 MARCH11A6NNE9 402 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 ANKRD30BLA7E2S9 258 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 TMEM250H0YL14 139 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 CLDN1O95832 211 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 PSMB3P49720 205 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 C1orf194Q5T5A4 169 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 DRAM1Q8N682 238 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 TIMM9Q9Y5J7 89 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 MBP02144 154 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 OR2T10Q8NGZ9 312 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 OR51B6Q9H340 312 aa11.34□□□□□ -0.59
SKA3-202ENST00000314759 CA6P23280 308 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 SPINK14Q6IE38 97 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 OR51I2Q9H344 312 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 AURKAIP1Q9NWT8 199 aaPredicted RBP11.33□□□□□ -0.6
SKA3-202ENST00000314759 TRAPPC2LQ9UL33 140 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 MED12LQ86YW9 2145 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 OR5B21A6NL26 309 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 TMEM210A6NLX4 147 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 SIRPB1O00241 398 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 CELA3AP09093 270 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 CHRNA7P36544 502 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 CYB561P49447 251 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 TDRG1Q3Y452 100 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 ZNF497Q6ZNH5 498 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 OR4F5Q8NH21 305 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 OR4F4Q96R69 305 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 MPC1Q9Y5U8 109 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 R4GN57 208 aa11.33□□□□□ -0.6
SKA3-202ENST00000314759 CCKARP32238 428 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 CNN1P51911 297 aaKnown RBP11.32□□□□□ -0.6
SKA3-202ENST00000314759 ZNF705AQ6ZN79 300 aaPredicted RBP11.32□□□□□ -0.6
SKA3-202ENST00000314759 CTXND1A0A1B0GTU2 59 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 FAM90A26D6RGX4 464 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 NTN3O00634 580 aaPredicted RBP11.32□□□□□ -0.6
SKA3-202ENST00000314759 RAMP3O60896 148 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 GYPAP02724 150 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 LHX2P50458 406 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 OR10G9Q8NGN4 311 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 OR10G7Q8NGN6 311 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 PKIBQ9C010 78 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 NAGKQ9UJ70 344 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 USF3Q68DE3 2245 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 DOCK11Q5JSL3 2073 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 KIR2DL5BA0A0G2JN68 375 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 KIR2DL5BA0A0G2JPC4 375 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 DLEU1O43261 78 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 GGCTO75223 188 aaKnown RBP11.32□□□□□ -0.6
SKA3-202ENST00000314759 OR2H2O95918 312 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 DEFA4P12838 97 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 KIR2DL5AQ8N109 375 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 R3HDM4Q96D70 268 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
SKA3-202ENST00000314759 DOCK10Q96BY6 2186 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 KRASP01116 189 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 ARR3P36575 388 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 MOB1BQ7L9L4 216 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 UBE2ZQ9H832 354 aaPredicted RBP11.31□□□□□ -0.6
SKA3-202ENST00000314759 PPP1R14DQ9NXH3 145 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 CLN8Q9UBY8 286 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 PILRBQ9UKJ0 227 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
SKA3-202ENST00000314759 C1QTNF9BB2RNN3 333 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 J3QT63 122 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 PAGE4O60829 102 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 ZNF705DP0CH99 300 aaPredicted RBP11.31□□□□□ -0.6
SKA3-202ENST00000314759 ZNF705BP0CI00 300 aaPredicted RBP11.31□□□□□ -0.6
SKA3-202ENST00000314759 GCH1P30793 250 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 G6PCP35575 357 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 CLDN18P56856 261 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 ACOT6Q3I5F7 207 aaPredicted RBP11.31□□□□□ -0.6
SKA3-202ENST00000314759 SPATA46Q5T0L3 261 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 CST9LP1Q5W188 147 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 ANAPC16Q96DE5 110 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 SDSLQ96GA7 329 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 TBX15Q96SF7 602 aa11.31□□□□□ -0.6
SKA3-202ENST00000314759 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
SKA3-202ENST00000314759 HPRT1P00492 218 aa11.3□□□□□ -0.6
SKA3-202ENST00000314759 IRF2P14316 349 aa11.3□□□□□ -0.6
SKA3-202ENST00000314759 EGR1P18146 543 aa11.3□□□□□ -0.6
SKA3-202ENST00000314759 NPPCP23582 126 aa11.3□□□□□ -0.6
SKA3-202ENST00000314759 IL3RAP26951 378 aa11.3□□□□□ -0.6
SKA3-202ENST00000314759 OR3A1P47881 315 aa11.3□□□□□ -0.6
SKA3-202ENST00000314759 RPS16P62249 146 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms