RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 FAM90A5PA8MXJ8 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A23PA8MXZ1 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 IGKV1D-16P01601 117 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A15PP0C7V4 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A13PP0C7W8 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A14PP0C7W9 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FAM90A24PP0C7X0 464 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 TMEM183AQ8IXX5 376 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 FGFRL1Q8N441 504 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 SPSB4Q96A44 273 aa11.83□□□□□ -0.51
CLCN6-201ENST00000312413 TRBV5-7A0A0A0MS05 114 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 LMX1BO60663 402 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 ERVFRD-1P60508 538 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 KIAA1644Q3SXP7 199 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 C19orf54Q5BKX5 351 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 WFDC3Q8IUB2 231 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 SH3BGRL3Q9H299 93 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 SLC25A10Q9UBX3 287 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-201ENST00000312413 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLCN6-201ENST00000312413 UPK3AO75631 287 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 SELENOHQ8IZQ5 122 aaKnown RBP11.83□□□□□ -0.52
CLCN6-201ENST00000312413 TPRX1Q8N7U7 411 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 AMELYQ99218 206 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 C5orf66Q9H5L9 145 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 WNT16Q9UBV4 365 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 GRIFINA4D1Z8 144 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 RNASE1P07998 156 aaKnown RBP11.83□□□□□ -0.52
CLCN6-201ENST00000312413 NUBP1P53384 320 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 OR52M1Q8NGK5 317 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 WFIKKN1Q96NZ8 548 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 SCN7AQ01118 1682 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 NPIPB6E9PJ23 425 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 PLAUP00749 431 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 PRSS2P07478 247 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 PSG4Q00888 419 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 KRTCAP3Q53RY4 240 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 MMD2Q8IY49 270 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 OR4A5Q8NH83 315 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 ZNF721Q8TF20 911 aa11.83□□□□□ -0.52
CLCN6-201ENST00000312413 NRAPQ86VF7 1730 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 DLL1O00548 723 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 ZNF430Q9H8G1 570 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-201ENST00000312413 FOXJ2Q9P0K8 574 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 SF3B6Q9Y3B4 125 aaKnown RBP11.82□□□□□ -0.52
CLCN6-201ENST00000312413 FOXS1O43638 330 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 ZNF506Q5JVG8 444 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 ATOH7Q8N100 152 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 PEF1Q9UBV8 284 aaKnown RBP11.82□□□□□ -0.52
CLCN6-201ENST00000312413 CTAG1AP78358 180 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 F11RQ9Y624 299 aaKnown RBP11.82□□□□□ -0.52
CLCN6-201ENST00000312413 NGFRP08138 427 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 ARL14EPLP0DKL9 152 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 C8orf88P0DMB2 117 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 FOXC1Q12948 553 aa11.82□□□□□ -0.52
CLCN6-201ENST00000312413 TOGARAM1Q9Y4F4 1720 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 RPS20P60866 119 aaKnown RBP11.81□□□□□ -0.52
CLCN6-201ENST00000312413 KCNMB2Q9Y691 235 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 ITGB4P16144 1822 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 PIN1P1O15428 100 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 MC5RP33032 325 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 ZFP36L2P47974 494 aaKnown RBP11.81□□□□□ -0.52
CLCN6-201ENST00000312413 TCF24Q7RTU0 167 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 DEFB123Q8N688 67 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 PPIAL4EA0A075B759 164 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 PPIAL4DF5H284 164 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 OR2H2O95918 312 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 PPIAL4FP0DN26 164 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 LGALS3P17931 250 aaKnown RBP11.81□□□□□ -0.52
CLCN6-201ENST00000312413 PEBP1P30086 187 aaKnown RBP11.81□□□□□ -0.52
CLCN6-201ENST00000312413 RPL8P62917 257 aaKnown RBP11.81□□□□□ -0.52
CLCN6-201ENST00000312413 KLRB1Q12918 225 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 GCSAMQ8N6F7 178 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 YBX2Q9Y2T7 364 aaKnown RBP11.81□□□□□ -0.52
CLCN6-201ENST00000312413 PPIAL4AQ9Y536 164 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 SOX21Q9Y651 276 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-201ENST00000312413 A0A1B0GV72 72 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 CRYBB3P26998 211 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 GFRA1P56159 465 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 JOSD1Q15040 202 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-201ENST00000312413 C1orf174Q8IYL3 243 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 OR10J6PQ8NGY7 276 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 SFRP2Q96HF1 295 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 NEU1Q99519 415 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 TNFRSF19Q9NS68 423 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 R4GN57 208 aa11.81□□□□□ -0.52
CLCN6-201ENST00000312413 FHITP49789 147 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 TNFRSF9Q07011 255 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 UNQ9370/PRO34162Q6UXP9 181 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 FAM181AQ8N9Y4 354 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 ZNF714Q96N38 554 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 SPOCK3Q9BQ16 436 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 CHRNA10Q9GZZ6 450 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 DNAJC4Q9NNZ3 241 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 RAXQ9Y2V3 346 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 GCM2O75603 506 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-201ENST00000312413 MPV17P39210 176 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 C2orf68Q2NKX9 166 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 AUP1Q9Y679 476 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 A0A0J9YW62 118 aa11.8□□□□□ -0.52
CLCN6-201ENST00000312413 TMEM250H0YL14 139 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms