RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 FCGR2CP31995 323 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 UBE2MP61081 183 aaKnown RBP14.76□□□□□ -0.05
HMGA1-201ENST00000311487 C2orf68Q2NKX9 166 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 Q6ZS49 121 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 LDLRAD3Q86YD5 345 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 OR2T35Q8NGX2 323 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 NANPQ8TBE9 248 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 ABHD14BQ96IU4 210 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 NECAP2Q9NVZ3 263 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 HILPDAQ9Y5L2 63 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 IGHV1-69DA0A0B4J2H0 117 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 J3QR06 171 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 OR2A4O95047 310 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 IGHV1-69P01742 117 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 RBP4P02753 201 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 GIPP09681 153 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-201ENST00000311487 OR8U9P0C7N5 309 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 SAA4P35542 130 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 SRP14P37108 136 aaKnown RBP14.76□□□□□ -0.05
HMGA1-201ENST00000311487 REG1BP48304 166 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 FXYD4P59646 89 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 SRSF7Q16629 238 aaKnown RBP eCLIP14.76□□□□□ -0.05
HMGA1-201ENST00000311487 ACTBL2Q562R1 376 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 VAX1Q5SQQ9 334 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 ZDHHC22Q8N966 263 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 OR2AK2Q8NG84 335 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 OR8U1Q8NH10 309 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 OR2A7Q96R45 310 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 CABLES2Q9BTV7 478 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 GON7Q9BXV9 100 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 UNKLQ9H9P5 680 aaKnown RBP14.76□□□□□ -0.05
HMGA1-201ENST00000311487 JPT1Q9UK76 154 aa14.76□□□□□ -0.05
HMGA1-201ENST00000311487 IFNA6P05013 189 aa14.75□□□□□ -0.05
HMGA1-201ENST00000311487 UBE2E1P51965 193 aa14.75□□□□□ -0.05
HMGA1-201ENST00000311487 NCR3LG1Q68D85 454 aa14.75□□□□□ -0.05
HMGA1-201ENST00000311487 OR10X1Q8NGY0 326 aa14.75□□□□□ -0.05
HMGA1-201ENST00000311487 GRPEL2Q8TAA5 225 aa14.75□□□□□ -0.05
HMGA1-201ENST00000311487 A0A0U1RQK1 487 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 NPFFO15130 113 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 AADACP22760 399 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 TSPAN5P62079 268 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 OVCH2Q7RTZ1 564 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 LYG1Q8N1E2 194 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 DYNAPQ8N1N2 210 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 ZNF439Q8NDP4 499 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 OR4P4Q8NGL7 312 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 OR9G1Q8NH87 305 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 WDR89Q96FK6 387 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-201ENST00000311487 GPHA2Q96T91 129 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 ZNF2Q9BSG1 426 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-201ENST00000311487 ABHD14AQ9BUJ0 271 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 RBM7Q9Y580 266 aaKnown RBP14.74□□□□□ -0.05
HMGA1-201ENST00000311487 NAV3Q8IVL0 2385 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 A0A087X0M5 115 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 IGKV1D-13A0A0B4J2D9 117 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 A0A1B0GX30 115 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 YPEL1O60688 119 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 IGKV1-13P0DP09 117 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 EPHA1P21709 976 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 LGALS4P56470 323 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 LINC00205P59089 165 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 RAP2BP61225 183 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 SSX2Q16385 188 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 SLC25A42Q86VD7 318 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 TMEM17Q86X19 198 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 H1FOOQ8IZA3 346 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-201ENST00000311487 OR11H6Q8NGC7 330 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 OR10A7Q8NGE5 316 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 OR52M1Q8NGK5 317 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 YPEL2Q96QA6 119 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 MS4A7Q9GZW8 240 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-201ENST00000311487 NUP50Q9UKX7 468 aa14.74□□□□□ -0.05
HMGA1-201ENST00000311487 POM121CA8CG34 1229 aa14.73□□□□□ -0.05
HMGA1-201ENST00000311487 GOSR2O14653 212 aa14.73□□□□□ -0.05
HMGA1-201ENST00000311487 TAS2R46P59540 309 aa14.73□□□□□ -0.05
HMGA1-201ENST00000311487 DHRS2Q13268 280 aa14.73□□□□□ -0.05
HMGA1-201ENST00000311487 RPL39P5Q59GN2 51 aa14.73□□□□□ -0.05
HMGA1-201ENST00000311487 ARRDC1Q8N5I2 433 aa14.73□□□□□ -0.05
HMGA1-201ENST00000311487 UXS1Q8NBZ7 420 aa14.73□□□□□ -0.05
HMGA1-201ENST00000311487 RAB9BQ9NP90 201 aa14.73□□□□□ -0.05
HMGA1-201ENST00000311487 ODF3BA8MYP8 253 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 BUB1B-PAK6H3BSN5 160 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 SIX6O95475 246 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 IGLV1-47P01700 117 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 RAB13P51153 203 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 PRRX1P54821 245 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 H2BFSP57053 126 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 HLA-DRB5Q30154 266 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 SLC25A48Q6ZT89 311 aaKnown RBP14.72□□□□□ -0.05
HMGA1-201ENST00000311487 C12orf45Q8N5I9 185 aaPredicted RBP14.72□□□□□ -0.05
HMGA1-201ENST00000311487 TOMM40LQ969M1 308 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 AJUBAQ96IF1 538 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 OR2D2Q9H210 308 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 CD24P25063 80 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 BAMBIQ13145 260 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 SECTM1Q8WVN6 248 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 AGMATQ9BSE5 352 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 IFI27L2Q9H2X8 130 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 TNFRSF19Q9NS68 423 aa14.72□□□□□ -0.05
HMGA1-201ENST00000311487 RGS11O94810 467 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms