RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 Q6ZS49 121 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 Q8NFD4 153 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 SDSLQ96GA7 329 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 NEU1Q99519 415 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 PRDM14Q9GZV8 571 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 C12orf49Q9H741 205 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 TMEM9BQ9NQ34 198 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 TNCP24821 2201 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 FAM166BA8MTA8 275 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 RBMXL2O75526 392 aaKnown RBP11.34□□□□□ -0.59
CCDC13-201ENST00000310232 HRASP01112 189 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 IL3RAP26951 378 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 SRD5A2P31213 254 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 RPL29P47914 159 aaKnown RBP11.34□□□□□ -0.59
CCDC13-201ENST00000310232 NUTF2P61970 127 aaKnown RBP11.34□□□□□ -0.59
CCDC13-201ENST00000310232 IFI44Q8TCB0 444 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 IL22RA2Q969J5 263 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 ACTR3CQ9C0K3 210 aaPredicted RBP11.34□□□□□ -0.59
CCDC13-201ENST00000310232 ZNF576Q9H609 170 aa11.34□□□□□ -0.59
CCDC13-201ENST00000310232 IGHV3-43A0A0B4J1X8 118 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 DEGS1O15121 323 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 IGHV3-13P01766 116 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 IGHV3-7P01780 117 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 IGHV3-43DP0DP04 118 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 PSMB3P49720 205 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 WDR86Q86TI4 376 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 OR2T10Q8NGZ9 312 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 TMEM170AQ8WVE7 144 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 P2RX4Q99571 388 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 PYGO2Q9BRQ0 406 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 PSMG3Q9BT73 122 aaPredicted RBP11.33□□□□□ -0.6
CCDC13-201ENST00000310232 POLR3KQ9Y2Y1 108 aaPredicted RBP11.33□□□□□ -0.6
CCDC13-201ENST00000310232 ZNF320A2RRD8 509 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 TOX3O15405 576 aaPredicted RBP11.33□□□□□ -0.6
CCDC13-201ENST00000310232 THBS3P49746 956 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 SPCS3P61009 180 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 MCEMP1Q8IX19 187 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 WDYHV1Q96HA8 205 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 CTDSP1Q9GZU7 261 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 PATZ1Q9HBE1 687 aaKnown RBP11.33□□□□□ -0.6
CCDC13-201ENST00000310232 MSL2Q9HCI7 577 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 TP53TG5Q9Y2B4 290 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 TNRC6BQ9UPQ9 1833 aaKnown RBP11.33□□□□□ -0.6
CCDC13-201ENST00000310232 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
CCDC13-201ENST00000310232 KALRNO60229 2985 aa11.33□□□□□ -0.6
CCDC13-201ENST00000310232 GJE1A6NN92 205 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 DEFB108AA8MXU0 73 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 S1PR2O95136 353 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 OR2H2O95918 312 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 SERF2P84101 59 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 LTC4SQ16873 150 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 RNASEH2CQ8TDP1 164 aaKnown RBP11.32□□□□□ -0.6
CCDC13-201ENST00000310232 DMXL1Q9Y485 3027 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 KMT2EQ8IZD2 1858 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 NDUFB4O95168 129 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 IFNA1P01562 189 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 S100GP29377 79 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 TNFRSF9Q07011 255 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 TCEAL6Q6IPX3 200 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 OR52L2PQ8NGH6 319 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 OR5A2Q8NGI9 324 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 SAP25Q8TEE9 199 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 OR2D2Q9H210 308 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 HIPK2Q9H2X6 1198 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 OR6C3Q9NZP0 311 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 ZNF391Q9UJN7 358 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 ODAMA1E959 279 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 C17orf98A8MV24 154 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 F2Z2F3 143 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC13-201ENST00000310232 CFIP05156 583 aa11.32□□□□□ -0.6
CCDC13-201ENST00000310232 CSMD1Q96PZ7 3565 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
CCDC13-201ENST00000310232 CDIPTO14735 213 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 MT-CO3P00414 261 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 CELA3BP08861 270 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 CTXN2P0C2S0 81 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 ZNF705DP0CH99 300 aaPredicted RBP11.31□□□□□ -0.6
CCDC13-201ENST00000310232 ZNF705BP0CI00 300 aaPredicted RBP11.31□□□□□ -0.6
CCDC13-201ENST00000310232 EDDM3BP56851 147 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 BRWD1-AS2P59051 145 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 GNB1P62873 340 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 ASPHD1Q5U4P2 390 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 RFESDQ8TAC1 157 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 FAM234AQ9H0X4 552 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 IL17BQ9UHF5 180 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 TRBV20OR9-2A0A075B6H5 130 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 WNT9BO14905 357 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 ZNF25P17030 456 aaPredicted RBP11.31□□□□□ -0.6
CCDC13-201ENST00000310232 CNN1P51911 297 aaKnown RBP11.31□□□□□ -0.6
CCDC13-201ENST00000310232 BATFQ16520 125 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 Q6P435 159 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 TMEM14EPQ6UXP3 125 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 OR2Y1Q8NGV0 311 aa11.31□□□□□ -0.6
CCDC13-201ENST00000310232 COX5BP10606 129 aa11.3□□□□□ -0.6
CCDC13-201ENST00000310232 C21orf62-AS1Q17RA5 79 aa11.3□□□□□ -0.6
CCDC13-201ENST00000310232 RIPPLY2Q5TAB7 128 aa11.3□□□□□ -0.6
CCDC13-201ENST00000310232 DBX2Q6ZNG2 339 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms