RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ZNF134P52741 427 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 NHLH2Q02577 135 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 TFF3Q07654 80 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 ZNF672Q499Z4 452 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-201ENST00000309469 GFOD1Q9NXC2 390 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 NDUFB7P17568 137 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 LOXP28300 417 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-201ENST00000309469 EWSR1Q01844 656 aaKnown RBP eCLIP17.59■□□□□ 0.41
ATG4D-201ENST00000309469 EIF5AL1Q6IS14 154 aaKnown RBP17.59■□□□□ 0.41
ATG4D-201ENST00000309469 MUC15Q8N387 334 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 LINC00574Q9H8X3 128 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 LYRM2Q9NU23 88 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-201ENST00000309469 SLC25A10Q9UBX3 287 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-201ENST00000309469 MMP24Q9Y5R2 645 aa17.59■□□□□ 0.41
ATG4D-201ENST00000309469 DSCAMO60469 2012 aa17.58■□□□□ 0.41
ATG4D-201ENST00000309469 ZNF729A6NN14 1252 aaPredicted RBP17.58■□□□□ 0.4
ATG4D-201ENST00000309469 LINC00473A8K010 186 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 ITGB1BP1O14713 200 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 TNFRSF13BO14836 293 aaPredicted RBP17.58■□□□□ 0.4
ATG4D-201ENST00000309469 PROP1O75360 226 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 TMEM50AO95807 157 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 IGHV3-7P01780 117 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 M6PRP20645 277 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 ZNF816Q0VGE8 651 aaPredicted RBP17.58■□□□□ 0.4
ATG4D-201ENST00000309469 UBAC2Q8NBM4 344 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 LINC00052Q96N35 136 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 TMEM204Q9BSN7 226 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 WFDC1Q9HC57 220 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 TAS2R3Q9NYW6 316 aa17.58■□□□□ 0.4
ATG4D-201ENST00000309469 IGHV1-69-2A0A0G2JMI3 117 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 hADV38S2A0JD32 116 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 SLC25A31Q9H0C2 315 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 IFI27L2Q9H2X8 130 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 IDI2-AS1Q9NZ38 188 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 ADGRG4Q8IZF6 3080 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 IGSF23A1L1A6 192 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 KRBOX1C9JBD0 128 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 ATG12O94817 140 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 CRYZL1O95825 349 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 PAX9P55771 341 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 LINC00205P59089 165 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 UTF1Q5T230 341 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 RAI1Q7Z5J4 1906 aaPredicted RBP17.57■□□□□ 0.4
ATG4D-201ENST00000309469 TMEM252Q8N6L7 170 aa17.57■□□□□ 0.4
ATG4D-201ENST00000309469 B8ZZF3 427 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 S1PR2O95136 353 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 KRASP01116 189 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 FAM157CP0CG43 387 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 DUTP33316 252 aaKnown RBP17.56■□□□□ 0.4
ATG4D-201ENST00000309469 RAB7AP51149 207 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 OR1S2Q8NGQ3 325 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 LEAP2Q969E1 77 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 LINC00312Q9Y6C7 94 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 CACNA1AO00555 2505 aa17.56■□□□□ 0.4
ATG4D-201ENST00000309469 ITPR1Q14643 2758 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 BORCS7-ASMTA0A0B4J1R7 106 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 SLC31A2O15432 143 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 G6PCP35575 357 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 MEF2CQ06413 473 aaPredicted RBP17.55■□□□□ 0.4
ATG4D-201ENST00000309469 TMEM30BQ3MIR4 351 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 NCR3LG1Q68D85 454 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 RAB40CQ96S21 281 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 ABHD14AQ9BUJ0 271 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 ARV1Q9H2C2 271 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 COA4Q9NYJ1 87 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 GAB2Q9UQC2 676 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 P0C879 139 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 CT45A1Q5HYN5 189 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 LYPD2Q6UXB3 125 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 CT45A3Q8NHU0 189 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 CD300LFQ8TDQ1 290 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 LPAR3Q9UBY5 353 aa17.55■□□□□ 0.4
ATG4D-201ENST00000309469 ZNF705EA8MWA4 302 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-201ENST00000309469 M0R1X1 148 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 NDUFB3O43676 98 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 FCN3O75636 299 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 NFYBP25208 207 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 HFEQ30201 348 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 RPL39P5Q59GN2 51 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 ODF3L1Q8IXM7 274 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 C19orf12Q9NSK7 152 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 LAMP3Q9UQV4 416 aa17.54■□□□□ 0.4
ATG4D-201ENST00000309469 TOR1AO14656 332 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 SYNGR2O43760 224 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 RPL23AP62750 156 aaKnown RBP17.53■□□□□ 0.4
ATG4D-201ENST00000309469 RPL31P62899 125 aaKnown RBP17.53■□□□□ 0.4
ATG4D-201ENST00000309469 MARC2Q969Z3 335 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 KALRNO60229 2985 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 FBXO24O75426 580 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 MMP23AO75900 390 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 LRRC10Q5BKY1 277 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 ZNF295-AS1Q8N0V1 137 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 ZNF439Q8NDP4 499 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 KAAG1Q9UBP8 84 aa17.53■□□□□ 0.4
ATG4D-201ENST00000309469 A0A1W2PPE3 182 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 FAM90A26D6RGX4 464 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 BAXQ07812 192 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 ZNF273Q14593 569 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 C4orf17Q53FE4 359 aa17.52■□□□□ 0.4
ATG4D-201ENST00000309469 PRAMEF5Q5TYX0 476 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms