RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TMEM30BQ3MIR4 351 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 MORN2Q502X0 79 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF585BQ52M93 769 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 FOXRED2Q8IWF2 684 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 OR8H3Q8N146 312 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 CCL17Q92583 94 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 LSM10Q969L4 123 aaKnown RBP9.83□□□□□ -0.84
TRIM40-205ENST00000307859 GSX2Q9BZM3 304 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 FAM212BQ9NTI7 297 aaPredicted RBP9.83□□□□□ -0.84
TRIM40-205ENST00000307859 CLN8Q9UBY8 286 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 APCP25054 2843 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 IGHV1-69-2A0A0G2JMI3 117 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF729A6NN14 1252 aaPredicted RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 E5RGE8 158 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 TMPRSS2O15393 492 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 SPDEFO95238 335 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 CATR1Q13166 79 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 THOC7Q6I9Y2 204 aaKnown RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 TCTEX1D1Q8N7M0 179 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 STOML3Q8TAV4 291 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 C11orf1Q9H5F2 150 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 PLEKHA2Q9HB19 425 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 CYTL1Q9NRR1 136 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 GNG12Q9UBI6 72 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 RNF150Q9ULK6 438 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 PSG11Q9UQ72 335 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 RCL1Q9Y2P8 373 aaKnown RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 NSG2Q9Y328 171 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 A0A0G2JRQ6 117 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 LINC00862A6NCI5 91 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 ST8SIA5O15466 376 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 ZG16O60844 167 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 PITX3O75364 302 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 FCN3O75636 299 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 FSTL3O95633 263 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 HOXB4P17483 251 aaPredicted RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 RPL30P62888 115 aaKnown RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 MEF2CQ06413 473 aaPredicted RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 LTC4SQ16873 150 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 ALKAL2Q6UX46 152 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF66Q6ZN08 573 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 FGFRL1Q8N441 504 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 DMBX1Q8NFW5 382 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 PHYHIPLQ96FC7 376 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 HSD17B10Q99714 261 aaKnown RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF471Q9BX82 626 aaPredicted RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 SDHAF2Q9NX18 166 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 GFOD1Q9NXC2 390 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 KAAG1Q9UBP8 84 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 SLC25A10Q9UBX3 287 aaPredicted RBP9.82□□□□□ -0.84
TRIM40-205ENST00000307859 LINC00312Q9Y6C7 94 aa9.82□□□□□ -0.84
TRIM40-205ENST00000307859 PDZD2O15018 2839 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 A0A1B0GU03 582 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 hADV38S2A0JD32 116 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 F5H0A9 414 aaPredicted RBP9.81□□□□□ -0.84
TRIM40-205ENST00000307859 IGKV1-5P01602 117 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF16P17020 682 aaPredicted RBP9.81□□□□□ -0.84
TRIM40-205ENST00000307859 S100A1P23297 94 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 RPL12P30050 165 aaKnown RBP9.81□□□□□ -0.84
TRIM40-205ENST00000307859 NKX2-1P43699 371 aaPredicted RBP9.81□□□□□ -0.84
TRIM40-205ENST00000307859 P2RY1P47900 373 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 RAB14P61106 215 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 ID3Q02535 119 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 GPR146Q96CH1 333 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 IFI27L2Q9H2X8 130 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 TAS2R3Q9NYW6 316 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 GAB2Q9UQC2 676 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 AUP1Q9Y679 476 aa9.81□□□□□ -0.84
TRIM40-205ENST00000307859 CCDC168Q8NDH2 2452 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 DNHD1Q96M86 4753 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 TAAR5O14804 337 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 NDUFA2O43678 99 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 MMP9P14780 707 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 OMGP23515 440 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 RAB7AP51149 207 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 HFEQ30201 348 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 Q3ZCU0 254 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 GPR157Q5UAW9 335 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 C11orf71Q6IPW1 123 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF439Q8NDP4 499 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 OR10A7Q8NGE5 316 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 IDI2-AS1Q9NZ38 188 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 LPAR3Q9UBY5 353 aa9.8□□□□□ -0.84
TRIM40-205ENST00000307859 PROP1O75360 226 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 NMBP08949 121 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 TPT1P13693 172 aaKnown RBP9.79□□□□□ -0.84
TRIM40-205ENST00000307859 NDUFB7P17568 137 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 LPAR6P43657 344 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 GPR12P47775 334 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 ZNF134P52741 427 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 BRWD1-AS2P59051 145 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 CXorf66Q5JRM2 361 aaPredicted RBP9.79□□□□□ -0.84
TRIM40-205ENST00000307859 LYPD2Q6UXB3 125 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 BTNL3Q6UXE8 466 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 TCTEX1D2Q8WW35 142 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 C19orf12Q9NSK7 152 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 CBLN4Q9NTU7 201 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 CTSZQ9UBR2 303 aa9.79□□□□□ -0.84
TRIM40-205ENST00000307859 HRNRQ86YZ3 2850 aaPredicted RBP9.79□□□□□ -0.84
TRIM40-205ENST00000307859 LINC00473A8K010 186 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms