RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TNFSF4P23510 183 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 AKR1C2P52895 323 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 AKR1C1Q04828 323 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 KLRB1Q12918 225 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 CLINT1Q14677 625 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 MSMO1Q15800 293 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 TEX36Q5VZQ5 186 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 ZNF788Q6ZQV5 615 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 C1orf229Q6ZS94 237 aaPredicted RBP5.42□□□□□ -1.54
USP47-201ENST00000305481 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 FAM216BQ8N7L0 139 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 C14orf79Q96F83 325 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 CCL13Q99616 98 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 MS4A7Q9GZW8 240 aaPredicted RBP5.42□□□□□ -1.54
USP47-201ENST00000305481 RNF212BA8MTL3 300 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 MED6O75586 246 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 S1PR2O95136 353 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 GRNP28799 593 aaKnown RBP5.42□□□□□ -1.54
USP47-201ENST00000305481 G6PCP35575 357 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 VAMP2P63027 116 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 ZNF816Q0VGE8 651 aaPredicted RBP5.42□□□□□ -1.54
USP47-201ENST00000305481 SWI5Q1ZZU3 235 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 MAJINQ3KP22 176 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 Q3ZCU0 254 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 NCMAPQ5T1S8 102 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 EIF5AL1Q6IS14 154 aaKnown RBP5.42□□□□□ -1.54
USP47-201ENST00000305481 BTNL8Q6UX41 500 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 PPP1R35Q8TAP8 253 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 HRH4Q9H3N8 390 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 MMP24Q9Y5R2 645 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 LRBAP50851 2863 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 DCHS2Q6V1P9 2916 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 BORCS7-ASMTA0A0B4J1R7 106 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 H3BP45 60 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 WRBO00258 174 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 SLC31A2O15432 143 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 TXNL1O43396 289 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 YPEL1O60688 119 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 CLDN1O95832 211 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 KRASP01116 189 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 SEC11BP0C7V7 166 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 FHITP49789 147 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 DYNLT3P51808 116 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 NCR3LG1Q68D85 454 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 SSX8Q7RTT4 187 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 SPAG16Q8N0X2 631 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 TMEM217Q8N7C4 229 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 HSD17B11Q8NBQ5 300 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 OR5C1Q8NGR4 320 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 RNASE11Q8TAA1 199 aaKnown RBP5.42□□□□□ -1.54
USP47-201ENST00000305481 LEAP2Q969E1 77 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 YPEL2Q96QA6 119 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 NCOR1P1Q9H4R4 102 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 MMP26Q9NRE1 261 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 CALYQ9NYX4 217 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 JPT1Q9UK76 154 aa5.42□□□□□ -1.54
USP47-201ENST00000305481 PIGBOS1A0A0B4J2F0 54 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 SYNGR2O43760 224 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 C1QL1O75973 258 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 DANCRP0C864 163 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 MUC1P15941 1255 aaPredicted RBP5.41□□□□□ -1.54
USP47-201ENST00000305481 TLE1Q04724 770 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 MIDNQ504T8 468 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 LYPD6BQ8NI32 183 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 TCTEX1D2Q8WW35 142 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 SLC25A31Q9H0C2 315 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 IFI27L2Q9H2X8 130 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 KCNJ16Q9NPI9 418 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 PARP11Q9NR21 331 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 OR6C3Q9NZP0 311 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 GNG12Q9UBI6 72 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 TRAV20A0A0B4J274 112 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 KBTBD11-OT1A0A1B0GTJ5 212 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 SIAH2O43255 324 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 CLDN14O95500 239 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 PLAUP00749 431 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 DUTP33316 252 aaKnown RBP5.41□□□□□ -1.54
USP47-201ENST00000305481 RPL39P5Q59GN2 51 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 UQCC3Q6UW78 93 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 ZNF66Q6ZN08 573 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 ST6GALNAC3Q8NDV1 305 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 LINC01560Q8TB33 94 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 RNASE6Q93091 150 aaKnown RBP5.41□□□□□ -1.54
USP47-201ENST00000305481 RAB40CQ96S21 281 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 DIRC2Q96SL1 478 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 HSD17B10Q99714 261 aaKnown RBP5.41□□□□□ -1.54
USP47-201ENST00000305481 ZNF665Q9H7R5 613 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 COA4Q9NYJ1 87 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 CLN8Q9UBY8 286 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 NUP50Q9UKX7 468 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 WSB1Q9Y6I7 421 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 FAM90A27PA6NNH2 459 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 CCL21O00585 134 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 NDUFA2O43678 99 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 IAPPP10997 89 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 ADCYAP1P18509 176 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 TNFRSF1AP19438 455 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 ADORA2A-AS1P86434 159 aa5.41□□□□□ -1.54
USP47-201ENST00000305481 TAGLNQ01995 201 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms