RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 ZNF488Q96MN9 340 aa12.4□□□□□ -0.42
HIPK3-201ENST00000303296 NPVFQ9HCQ7 196 aa12.4□□□□□ -0.42
HIPK3-201ENST00000303296 RCC1P18754 421 aaPredicted RBP12.4□□□□□ -0.42
HIPK3-201ENST00000303296 LEMD1Q68G75 181 aa12.4□□□□□ -0.42
HIPK3-201ENST00000303296 PGLYRP3Q96LB9 341 aa12.4□□□□□ -0.42
HIPK3-201ENST00000303296 SRD5A2P31213 254 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 DEFB121Q5J5C9 76 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 PEAR1Q5VY43 1037 aaPredicted RBP12.39□□□□□ -0.43
HIPK3-201ENST00000303296 ASB10Q8WXI3 467 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 DOCK7Q96N67 2140 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 EIF3GO75821 320 aaKnown RBP eCLIP12.39□□□□□ -0.43
HIPK3-201ENST00000303296 PRR35P0CG20 571 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 PSG9Q00887 426 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 MRPL24Q96A35 216 aaKnown RBP12.39□□□□□ -0.43
HIPK3-201ENST00000303296 ZNF142P52746 1687 aaPredicted RBP12.39□□□□□ -0.43
HIPK3-201ENST00000303296 SFTPCP11686 197 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 MMP16P51512 607 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 PWWP2BQ6NUJ5 590 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 CTXND1A0A1B0GTU2 59 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 PLPPR5Q32ZL2 321 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 FLRT3Q9NZU0 649 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 A0A0A6YYD5 115 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 NPC2P61916 151 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 TMEM240Q5SV17 173 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 ASCL4Q6XD76 172 aa12.39□□□□□ -0.43
HIPK3-201ENST00000303296 TM4SF4P48230 202 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 SRSF4Q08170 494 aaKnown RBP12.38□□□□□ -0.43
HIPK3-201ENST00000303296 FAM209BQ5JX69 171 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 S100A7L2Q5SY68 101 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 ZNF562Q6V9R5 426 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 NT5CQ8TCD5 201 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 LEAP2Q969E1 77 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 ST6GAL2Q96JF0 529 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 KCNK17Q96T54 332 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 EFNB1P98172 346 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 C3P01024 1663 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 SPAARA0A1B0GVQ0 90 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 NFAM1Q8NET5 270 aaPredicted RBP12.38□□□□□ -0.43
HIPK3-201ENST00000303296 TMEM250H0YL14 139 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 NPPCP23582 126 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 LHX9Q9NQ69 397 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 SLC17A5Q9NRA2 495 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 PLSCR2Q9NRY7 297 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 PCP4P48539 62 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 SRSF6Q13247 344 aaKnown RBP12.38□□□□□ -0.43
HIPK3-201ENST00000303296 COL1A1P02452 1464 aaPredicted RBP12.38□□□□□ -0.43
HIPK3-201ENST00000303296 TRA2AQ13595 282 aaKnown RBP eCLIP12.38□□□□□ -0.43
HIPK3-201ENST00000303296 UQCR10Q9UDW1 63 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 KCNE5Q9UJ90 142 aa12.38□□□□□ -0.43
HIPK3-201ENST00000303296 BGLAPP02818 100 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 SLC25A1P53007 311 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 ANKRD20A5PA0PJZ0 165 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 CD8AP01732 235 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 CRHP06850 196 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 SRIP30626 198 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 TMEM42Q69YG0 159 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 TEX29Q8N6K0 151 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 CYB561D1Q8N8Q1 229 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 GLMPQ8WWB7 406 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 EEF1AKMT3Q96AZ1 226 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 ASB1Q9Y576 335 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 OR10J3Q5JRS4 329 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 OR4D11Q8NGI4 311 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 TLNRD1Q9H1K6 362 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 A0A1B0GV90 55 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 HOXA5P20719 270 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 ST6GALNAC6Q969X2 333 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 SCGB3A1Q96QR1 104 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 SPATA31D1Q6ZQQ2 1576 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 A0A0U1RQV5 110 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 CXorf65A6NEN9 183 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 MESTQ5EB52 335 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 TMEM196Q5HYL7 178 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 GOLT1AQ6ZVE7 132 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 GATD1Q8NB37 220 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 CXCL16Q9H2A7 254 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 CISD1Q9NZ45 108 aaKnown RBP12.37□□□□□ -0.43
HIPK3-201ENST00000303296 CYB5R3P00387 301 aaPredicted RBP12.37□□□□□ -0.43
HIPK3-201ENST00000303296 FGF5P12034 268 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 ZFP36L2P47974 494 aaKnown RBP12.37□□□□□ -0.43
HIPK3-201ENST00000303296 LCN2P80188 198 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 SIGLEC7Q9Y286 467 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 SPCS1Q9Y6A9 102 aa12.37□□□□□ -0.43
HIPK3-201ENST00000303296 TRGC2P03986 189 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 PMCHL1Q16048 86 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 PRSS53Q2L4Q9 553 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 STHQ8IWL8 128 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 SLC6A13Q9NSD5 602 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 TFF2Q03403 129 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 PAPPA-AS1Q5QFB9 102 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 OPN3Q9H1Y3 402 aaPredicted RBP12.36□□□□□ -0.43
HIPK3-201ENST00000303296 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 IGHV3-64A0A075B6Q5 118 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
HIPK3-201ENST00000303296 OR11H1Q8NG94 326 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms