RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 EN2P19622 333 aaPredicted RBP9.69□□□□□ -0.86
TRUB1-201ENST00000298746 ADMP35318 185 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 IER3P46695 156 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
TRUB1-201ENST00000298746 H2BFWTQ7Z2G1 175 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 OR10D3Q8NH80 312 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 TMEM106BQ9NUM4 274 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 CLEC1BQ9P126 229 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 REV3LO60673 3130 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 ZG16O60844 167 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 LILRA1O75019 489 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 CBR3O75828 277 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 SLC35B1P78383 322 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 GCSAMLQ5JQS6 135 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 COA6Q5JTJ3 125 aaKnown RBP9.69□□□□□ -0.86
TRUB1-201ENST00000298746 ASCL4Q6XD76 172 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 R3HDM4Q96D70 268 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 WDYHV1Q96HA8 205 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 OR2J1Q9GZK6 312 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 ZNF552Q9H707 407 aaPredicted RBP9.69□□□□□ -0.86
TRUB1-201ENST00000298746 SERTAD4Q9NUC0 356 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 ZNF586Q9NXT0 402 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 PPIAL4AQ9Y536 164 aa9.69□□□□□ -0.86
TRUB1-201ENST00000298746 GTF3C1Q12789 2109 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 A0A1W2PR77 199 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 A8MXE2 369 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 ZIC3O60481 467 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 NGFP01138 241 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 CA6P23280 308 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 AMTP48728 403 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 PTTG1IPP53801 180 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 NXPH1P58417 271 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 SYT13Q7L8C5 426 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 KMT5CQ86Y97 462 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 SLC25A45Q8N413 288 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 OR10G8Q8NGN5 311 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 ZDHHC16Q969W1 377 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 GPR35Q9HC97 309 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 DNAJC4Q9NNZ3 241 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 GCM1Q9NP62 436 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 FOXJ2Q9P0K8 574 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 LRP5LA4QPB2 252 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 SERF1AO75920 110 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 NXPH2O95156 264 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 COL5A1-AS1Q5SY13 56 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 TMEM42Q69YG0 159 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 GUSBP11Q6P575 273 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 FADS6Q8N9I5 356 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 CPEB3Q8NE35 698 aaKnown RBP9.68□□□□□ -0.86
TRUB1-201ENST00000298746 PYGO2Q9BRQ0 406 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 FSCN3Q9NQT6 498 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 C20orf202A1L168 122 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 RNF212BA8MTL3 300 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 ETV2O00321 342 aaPredicted RBP9.68□□□□□ -0.86
TRUB1-201ENST00000298746 SLC17A3O00476 420 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 RANP62826 216 aaKnown RBP9.68□□□□□ -0.86
TRUB1-201ENST00000298746 LCN2P80188 198 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 KIAA1644Q3SXP7 199 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 DCAF10Q5QP82 559 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 Q6ZN92 141 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 ZNF573Q86YE8 665 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 MIEN1Q9BRT3 115 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 HINT2Q9BX68 163 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 OR2D2Q9H210 308 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.68□□□□□ -0.86
TRUB1-201ENST00000298746 NAT8BQ9UHF3 227 aa9.68□□□□□ -0.86
TRUB1-201ENST00000298746 IGLV3-32A0A0A0MS00 114 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 SNURFLB1AK76 121 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 C2CD4DB7Z1M9 353 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 IGKV1-39P01597 117 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 IGKV1D-39P04432 117 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 OTX2P32243 289 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 NTF4P34130 210 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 GNG10P50151 68 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 LSM10Q969L4 123 aaKnown RBP9.67□□□□□ -0.86
TRUB1-201ENST00000298746 HEYLQ9NQ87 328 aaPredicted RBP9.67□□□□□ -0.86
TRUB1-201ENST00000298746 DLL3Q9NYJ7 618 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 TMEM210A6NLX4 147 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 IGFBP4P22692 258 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 RAB7AP51149 207 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
TRUB1-201ENST00000298746 TCL1AP56279 114 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 RPL19P84098 196 aaKnown RBP9.67□□□□□ -0.86
TRUB1-201ENST00000298746 RELQ04864 619 aaPredicted RBP9.67□□□□□ -0.86
TRUB1-201ENST00000298746 CATR1Q13166 79 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 ZNF324BQ6AW86 544 aaPredicted RBP9.67□□□□□ -0.86
TRUB1-201ENST00000298746 TIPARPQ7Z3E1 657 aaKnown RBP9.67□□□□□ -0.86
TRUB1-201ENST00000298746 LINC01551Q86U37 167 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 OR5A2Q8NGI9 324 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 SFRP2Q96HF1 295 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 MRPL18Q9H0U6 180 aaKnown RBP9.67□□□□□ -0.86
TRUB1-201ENST00000298746 LPAR2Q9HBW0 351 aa9.67□□□□□ -0.86
TRUB1-201ENST00000298746 DIRC3C9JPN6 131 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 GRPP07492 148 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 CEACAM21Q3KPI0 293 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 PCSK4Q6UW60 755 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 DRAM1Q8N682 238 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 STARD4Q96DR4 205 aa9.66□□□□□ -0.86
TRUB1-201ENST00000298746 CRIM1Q9NZV1 1036 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms