RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 HSF4Q9ULV5 492 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 TECTAO75443 2155 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 ZNF816-ZNF321PA0A0X1KG74 233 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 CST2P09228 141 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 COL8A2P25067 703 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 FUT6P51993 359 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 OCIAD2Q56VL3 154 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 GFI1BQ5VTD9 330 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 Q6ZRM9 215 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 FOXL2NBQ6ZUU3 175 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 CXorf67Q86X51 503 aaPredicted RBP11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 SUMF2Q8NBJ7 301 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 ST6GALNAC3Q8NDV1 305 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 OR4D5Q8NGN0 318 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 SYT3Q9BQG1 590 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 KPTNQ9Y664 436 aa11.29□□□□□ -0.6
KCNIP3-201ENST00000295225 ZFP92A6NM28 416 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 BMP5P22003 454 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 RPS23P62266 143 aaKnown RBP11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 EXT1Q16394 746 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 OR2T2Q6IF00 324 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 LCN15Q6UWW0 184 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 GALNT14Q96FL9 552 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 GINS3Q9BRX5 216 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 GEMIN7Q9H840 131 aaKnown RBP11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 SH2D2AQ9NP31 389 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 ERRFI1Q9UJM3 462 aaPredicted RBP11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 M0QZ24 198 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 OR2C1O95371 312 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 CXCL1P09341 107 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 PSG2P11465 335 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 ATP1A1-AS1Q5TC04 95 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 TMEM222Q9H0R3 208 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 RNF150Q9ULK6 438 aa11.28□□□□□ -0.6
KCNIP3-201ENST00000295225 A0A087WZY1 265 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 K7ERU9 68 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 MMP7P09237 267 aaPredicted RBP11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 CA6P23280 308 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 BRS3P32247 399 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 TIMP3P35625 211 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 SPINK9Q5DT21 86 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 ORAOV1Q8WV07 137 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 PSMF1Q92530 271 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 SLC35B3Q9H1N7 401 aa11.27□□□□□ -0.6
KCNIP3-201ENST00000295225 GJE1A6NN92 205 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 KIAA1324LA8MWY0 1029 aaPredicted RBP11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 LAMTOR5O43504 91 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 TK1P04183 234 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 SEC11BP0C7V7 166 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 CYB561P49447 251 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 UBE2V1Q13404 147 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 IL11RAQ14626 422 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 TMEM42Q69YG0 159 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 SPSB3Q6PJ21 355 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 MALSU1Q96EH3 234 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 CACNA1HO95180 2353 aa11.27□□□□□ -0.61
KCNIP3-201ENST00000295225 LOC105371242A0A075B767 164 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 H3BQ15 152 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 K7N7A8 449 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 SIRPB1O00241 398 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 WISP2O76076 250 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 SRD5A2P31213 254 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 NDUFA6P56556 154 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 RAB1AP62820 205 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 WDR5BQ86VZ2 330 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 LYPD6BQ8NI32 183 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 CT55Q8WUE5 264 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 RAB39BQ96DA2 213 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 ADGRG7Q96K78 797 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 WDR54Q9H977 334 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 PRSS50Q9UI38 385 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 PITPNC1Q9UKF7 332 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 ERVFC1-1P60608 527 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 POLEQ07864 2286 aa11.26□□□□□ -0.61
KCNIP3-201ENST00000295225 RBFOX3A6NFN3 312 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 WDR1O75083 606 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 MPLP40238 635 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 ELLP55199 621 aaPredicted RBP11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 ERVFRD-1P60508 538 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 RAB11AP62491 216 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 NUFIP2Q7Z417 695 aaKnown RBP11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 ZNF100Q8IYN0 542 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 M1APQ8TC57 530 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 TAAR3PQ9P1P4 343 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 ARFGEF3Q5TH69 2177 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 IGHV3-13P01766 116 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 IGHV3-7P01780 117 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 CELA3BP08861 270 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 MMP9P14780 707 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 ARL16Q0P5N6 197 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 OR8B8Q15620 311 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 LINC01551Q86U37 167 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 Q9N2K0 584 aa11.25□□□□□ -0.61
KCNIP3-201ENST00000295225 KCNS2Q9ULS6 477 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms