RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SPRNQ5BIV9 151 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZADH2Q8N4Q0 377 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZNF645Q8N7E2 425 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 CYB561D1Q8N8Q1 229 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 LSM10Q969L4 123 aaKnown RBP13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 OOEPA6NGQ2 149 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 CD55P08174 381 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 EGR1P18146 543 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 SEM1Q6ZVN7 128 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZNF561Q8N587 486 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 RBMXL1Q96E39 390 aaKnown RBP13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 HES4Q9HCC6 221 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZNF71Q9NQZ8 489 aaPredicted RBP13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 RPRMQ9NS64 109 aa13.24□□□□□ -0.29
NCKIPSD-201ENST00000294129 POLEQ07864 2286 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZNF727A8MUV8 499 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 UBE2KP61086 200 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 SMIM21Q3B7S5 101 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 FAM201AQ5SY85 155 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 GSN-AS1Q9NRJ2 163 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 NQO2P16083 231 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 TLE4Q04727 773 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 IGFL2Q6UWQ7 119 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZDHHC16Q969W1 377 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 PLSCR4Q9NRQ2 329 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 TRAV20A0A0B4J274 112 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 UBE2CO00762 179 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 SPRY3O43610 288 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 LMO1P25800 156 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 SSX9Q7RTT3 188 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 CD177Q8N6Q3 437 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZNF525Q8N782 197 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 S100PBPQ96BU1 408 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 RBKSQ9H477 322 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZNF665Q9H7R5 613 aa13.23□□□□□ -0.29
NCKIPSD-201ENST00000294129 HCFC1P51610 2035 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 K7EM74 188 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 AGAP20933 346 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 EDDM3BP56851 147 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 OR4C12Q96R67 309 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 URGCP-MRPS24S4R325 110 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 YLPM1P49750 1951 aaKnown RBP13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 RNF212BA8MTL3 300 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 S100A8P05109 93 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 SMIM6P0DI80 62 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 PAX6P26367 422 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 SLC35E4Q6ICL7 350 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZNRF1Q8ND25 227 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 KIAA1456Q9P272 454 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 GNG12Q9UBI6 72 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 PTPRBP23467 1997 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 SPTA1P02549 2419 aa13.22□□□□□ -0.29
NCKIPSD-201ENST00000294129 ODAMA1E959 279 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 SLC25A6P12236 298 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 RAB5AP20339 215 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 PRDX2P32119 198 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 HBG1P69891 147 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 HBG2P69892 147 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 ICAM4Q14773 271 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 RNF212Q495C1 297 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 LINC00473A8K010 186 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 AHRRA9YTQ3 701 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 H3BQ15 152 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 TNFRSF9Q07011 255 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 SLC38A11Q08AI6 406 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 SSX7Q7RTT5 188 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 C1orf162Q8NEQ5 155 aaPredicted RBP13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 ZNF251Q9BRH9 671 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 MMP24Q9Y5R2 645 aa13.21□□□□□ -0.29
NCKIPSD-201ENST00000294129 SELLP14151 372 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 RAB2AP61019 212 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 RAB11AP62491 216 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 CATR1Q13166 79 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 MOGAT3Q86VF5 341 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 LEAP2Q969E1 77 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 NBASA2RRP1 2371 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 ZNF891A8MT65 544 aaPredicted RBP13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 ZG16O60844 167 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 SRP19P09132 144 aaKnown RBP13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 KITLGP21583 273 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 RAB39BQ96DA2 213 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 OR2V2Q96R30 315 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 TAGLN2P37802 199 aaKnown RBP13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 BRWD1-AS2P59051 145 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 ZNF474Q6S9Z5 364 aaPredicted RBP13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 ZNF429Q86V71 674 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 CLDND2Q8NHS1 167 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 MIOXQ9UGB7 285 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 SLC25A15Q9Y619 301 aa13.2□□□□□ -0.3
NCKIPSD-201ENST00000294129 TPRP12270 2363 aaKnown RBP13.19□□□□□ -0.3
NCKIPSD-201ENST00000294129 DSCAMO60469 2012 aa13.19□□□□□ -0.3
NCKIPSD-201ENST00000294129 OR2C1O95371 312 aa13.19□□□□□ -0.3
NCKIPSD-201ENST00000294129 IGLV1-44P01699 117 aa13.19□□□□□ -0.3
NCKIPSD-201ENST00000294129 CD200P41217 278 aa13.19□□□□□ -0.3
NCKIPSD-201ENST00000294129 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
NCKIPSD-201ENST00000294129 H2BFWTQ7Z2G1 175 aa13.19□□□□□ -0.3
NCKIPSD-201ENST00000294129 DEFB108BQ8NET1 73 aa13.19□□□□□ -0.3
NCKIPSD-201ENST00000294129 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms