RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 LDLRAD4O15165 306 aa19.55■□□□□ 0.72
U2AF1-201ENST00000291552 OR8U8P0C7N1 319 aa19.55■□□□□ 0.72
U2AF1-201ENST00000291552 MAP2K4P45985 399 aa19.55■□□□□ 0.72
U2AF1-201ENST00000291552 FABP5Q01469 135 aa19.55■□□□□ 0.72
U2AF1-201ENST00000291552 MLLT11Q13015 90 aaPredicted RBP19.55■□□□□ 0.72
U2AF1-201ENST00000291552 PLAC9Q5JTB6 97 aa19.55■□□□□ 0.72
U2AF1-201ENST00000291552 ZNF660Q6AZW8 331 aaPredicted RBP19.55■□□□□ 0.72
U2AF1-201ENST00000291552 C12orf4Q9NQ89 552 aa19.55■□□□□ 0.72
U2AF1-201ENST00000291552 WASHC3Q9Y3C0 194 aa19.55■□□□□ 0.72
U2AF1-201ENST00000291552 CRHBPP24387 322 aa19.54■□□□□ 0.72
U2AF1-201ENST00000291552 CALRP27797 417 aaKnown RBP19.54■□□□□ 0.72
U2AF1-201ENST00000291552 CEACAM6P40199 344 aa19.54■□□□□ 0.72
U2AF1-201ENST00000291552 VEGFCP49767 419 aa19.54■□□□□ 0.72
U2AF1-201ENST00000291552 LINC00205P59089 165 aa19.54■□□□□ 0.72
U2AF1-201ENST00000291552 PTX4Q96A99 478 aa19.54■□□□□ 0.72
U2AF1-201ENST00000291552 NUBP2Q9Y5Y2 271 aa19.54■□□□□ 0.72
U2AF1-201ENST00000291552 A3GALT2U3KPV4 340 aa19.54■□□□□ 0.72
U2AF1-201ENST00000291552 A0A1W2PN81 502 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 ARL6IP5O75915 188 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 ZBTB25P24278 435 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 CHRNA7P36544 502 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 TRAM1Q15629 374 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 DRAXINQ8NBI3 349 aaPredicted RBP19.53■□□□□ 0.72
U2AF1-201ENST00000291552 DCUN1D4Q92564 292 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 FAM3DQ96BQ1 224 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 WWC2-AS2Q96NR7 200 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 RNF150Q9ULK6 438 aa19.53■□□□□ 0.72
U2AF1-201ENST00000291552 FOXA2Q9Y261 457 aaPredicted RBP19.53■□□□□ 0.72
U2AF1-201ENST00000291552 RBBP9O75884 186 aa19.52■□□□□ 0.72
U2AF1-201ENST00000291552 PSMA1P25786 263 aaKnown RBP19.52■□□□□ 0.72
U2AF1-201ENST00000291552 MC5RP33032 325 aa19.52■□□□□ 0.72
U2AF1-201ENST00000291552 PRSS48Q7RTY5 328 aa19.52■□□□□ 0.72
U2AF1-201ENST00000291552 ZNF383Q8NA42 475 aa19.52■□□□□ 0.72
U2AF1-201ENST00000291552 EDARADDQ8WWZ3 215 aa19.52■□□□□ 0.72
U2AF1-201ENST00000291552 TPSG1Q9NRR2 321 aa19.52■□□□□ 0.72
U2AF1-201ENST00000291552 MGAT4AQ9UM21 535 aa19.52■□□□□ 0.72
U2AF1-201ENST00000291552 ZNF256Q9Y2P7 627 aaPredicted RBP19.52■□□□□ 0.72
U2AF1-201ENST00000291552 TMEM272A0A1B0GTI8 110 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 H7C2Y5 167 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 HSPA12AO43301 675 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 IGKV1-16P04430 117 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 GSTP1P09211 210 aaKnown RBP19.51■□□□□ 0.71
U2AF1-201ENST00000291552 PLGLAQ15195 96 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 PSG5Q15238 335 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 C2orf76Q3KRA6 126 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 CD200R1LQ6Q8B3 271 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 MGLLQ99685 303 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 CMSS1Q9BQ75 279 aaKnown RBP19.51■□□□□ 0.71
U2AF1-201ENST00000291552 FAM103A1Q9BTL3 118 aaKnown RBP19.51■□□□□ 0.71
U2AF1-201ENST00000291552 CCDC90BQ9GZT6 254 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 TOLLIPQ9H0E2 274 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 GHITMQ9H3K2 345 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 KCNK7Q9Y2U2 307 aa19.51■□□□□ 0.71
U2AF1-201ENST00000291552 TNCP24821 2201 aa19.5■□□□□ 0.71
U2AF1-201ENST00000291552 SHISA3A0PJX4 238 aa19.5■□□□□ 0.71
U2AF1-201ENST00000291552 SLURP1P55000 103 aa19.5■□□□□ 0.71
U2AF1-201ENST00000291552 SSX1Q16384 188 aa19.5■□□□□ 0.71
U2AF1-201ENST00000291552 HES5Q5TA89 166 aa19.5■□□□□ 0.71
U2AF1-201ENST00000291552 TCTEX1D1Q8N7M0 179 aa19.5■□□□□ 0.71
U2AF1-201ENST00000291552 DLX4Q92988 240 aaPredicted RBP19.5■□□□□ 0.71
U2AF1-201ENST00000291552 CLCC1Q96S66 551 aa19.5■□□□□ 0.71
U2AF1-201ENST00000291552 METTL1Q9UBP6 276 aaKnown RBP19.5■□□□□ 0.71
U2AF1-201ENST00000291552 OVOL1O14753 267 aa19.49■□□□□ 0.71
U2AF1-201ENST00000291552 LGALS1P09382 135 aaKnown RBP19.49■□□□□ 0.71
U2AF1-201ENST00000291552 MOGAT2Q3SYC2 334 aa19.49■□□□□ 0.71
U2AF1-201ENST00000291552 PPP1R27Q86WC6 154 aa19.49■□□□□ 0.71
U2AF1-201ENST00000291552 OR56B1Q8NGI3 324 aa19.49■□□□□ 0.71
U2AF1-201ENST00000291552 ABHD5Q8WTS1 349 aa19.49■□□□□ 0.71
U2AF1-201ENST00000291552 RNF5Q99942 180 aa19.49■□□□□ 0.71
U2AF1-201ENST00000291552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.49■□□□□ 0.71
U2AF1-201ENST00000291552 RDH8Q9NYR8 311 aa19.49■□□□□ 0.71
U2AF1-201ENST00000291552 V9GY05 133 aa19.49■□□□□ 0.71
U2AF1-201ENST00000291552 IGHV4OR15-8A0A075B7B6 117 aa19.48■□□□□ 0.71
U2AF1-201ENST00000291552 A0A087WW49 117 aa19.48■□□□□ 0.71
U2AF1-201ENST00000291552 TRDCB7Z8K6 153 aa19.48■□□□□ 0.71
U2AF1-201ENST00000291552 DENRO43583 198 aaKnown RBP19.48■□□□□ 0.71
U2AF1-201ENST00000291552 CA2P00918 260 aa19.48■□□□□ 0.71
U2AF1-201ENST00000291552 CD3GP09693 182 aa19.48■□□□□ 0.71
U2AF1-201ENST00000291552 NHLRC4P0CG21 123 aaPredicted RBP19.48■□□□□ 0.71
U2AF1-201ENST00000291552 INSL3P51460 131 aa19.48■□□□□ 0.71
U2AF1-201ENST00000291552 SSBP2P81877 361 aaPredicted RBP19.48■□□□□ 0.71
U2AF1-201ENST00000291552 C5orf30Q96GV9 206 aa19.48■□□□□ 0.71
U2AF1-201ENST00000291552 ACOT13Q9NPJ3 140 aa19.48■□□□□ 0.71
U2AF1-201ENST00000291552 OR10A3P58181 314 aa19.47■□□□□ 0.71
U2AF1-201ENST00000291552 TBCEQ15813 527 aaPredicted RBP19.47■□□□□ 0.71
U2AF1-201ENST00000291552 UNQ5815/PRO19632Q6UWF5 114 aa19.47■□□□□ 0.71
U2AF1-201ENST00000291552 ZNF562Q6V9R5 426 aa19.47■□□□□ 0.71
U2AF1-201ENST00000291552 LFNGQ8NES3 379 aa19.47■□□□□ 0.71
U2AF1-201ENST00000291552 ASCL2Q99929 193 aa19.47■□□□□ 0.71
U2AF1-201ENST00000291552 ZNF221Q9UK13 617 aa19.47■□□□□ 0.71
U2AF1-201ENST00000291552 U3KQK5 164 aa19.47■□□□□ 0.71
U2AF1-201ENST00000291552 LINC01619G3V211 115 aa19.46■□□□□ 0.71
U2AF1-201ENST00000291552 ARPC1BO15143 372 aaKnown RBP19.46■□□□□ 0.71
U2AF1-201ENST00000291552 SPDEFO95238 335 aa19.46■□□□□ 0.71
U2AF1-201ENST00000291552 IGHV3-11P01762 117 aa19.46■□□□□ 0.71
U2AF1-201ENST00000291552 TFAP2AP05549 437 aa19.46■□□□□ 0.71
U2AF1-201ENST00000291552 AKIRIN2Q53H80 203 aa19.46■□□□□ 0.71
U2AF1-201ENST00000291552 ACTBL2Q562R1 376 aa19.46■□□□□ 0.71
U2AF1-201ENST00000291552 PDPNQ86YL7 162 aa19.46■□□□□ 0.71
U2AF1-201ENST00000291552 CABLES2Q9BTV7 478 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms