RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SCN5AQ14524 2016 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 EPOPA6NHQ4 379 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 GFRA1P56159 465 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 IL11RAQ14626 422 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 IZUMO4Q1ZYL8 232 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 C2orf83Q53S99 150 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 TMEM70Q9BUB7 260 aa9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 COLQQ9Y215 455 aaPredicted RBP9.34□□□□□ -0.91
PKNOX1-201ENST00000291547 IGHV1OR21-1A0A087WYE8 117 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 TGIF2-C20orf24A0A0A6YYL0 155 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 RPL36A-HNRNPH2H7BZ11 118 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 KLK10O43240 276 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 COX5BP10606 129 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 FCARP24071 287 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 TSPAN7P41732 249 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 GZMMP51124 257 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 NUDT3O95989 172 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 ROM1Q03395 351 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 CHST5Q9GZS9 411 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 RAB1BQ9H0U4 201 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 SNRNP200O75643 2136 aaKnown RBP9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 PPP1CCP36873 323 aaKnown RBP9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 KIR3DL2P43630 455 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 FHITP49789 147 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 PSG6Q00889 435 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 PRSS8Q16651 343 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 ISXQ2M1V0 245 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 WIPI2Q9Y4P8 454 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 F11RQ9Y624 299 aaKnown RBP9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 HLA-DRB1P01911 266 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 GAGE1Q13065 139 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 MMDQ15546 238 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 RNFT1Q5M7Z0 435 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 SMRP1Q8NCR6 262 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 LSM10Q969L4 123 aaKnown RBP9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 FOXJ2Q9P0K8 574 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 HSPB7Q9UBY9 170 aa9.33□□□□□ -0.92
PKNOX1-201ENST00000291547 COLCA2A8K830 154 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 ZNF506Q5JVG8 444 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 PTPMT1Q8WUK0 201 aaPredicted RBP9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 RND1Q92730 232 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 SF3B5Q9BWJ5 86 aaKnown RBP9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 FAM60AQ9NP50 221 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 RNF7Q9UBF6 113 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 OR51B2Q9Y5P1 312 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 ITGB1BP1O14713 200 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 CD160O95971 181 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 KIAA1644Q3SXP7 199 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 UBALD2Q8IYN6 164 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 NUDT16L1Q9BRJ7 211 aaKnown RBP9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 MYO16Q9Y6X6 1858 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 RBFOX2O43251 390 aaKnown RBP eCLIP9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 CSRP3P50461 194 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 ZIC1Q15915 447 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 KCNMB1Q16558 191 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 OR2H1Q9GZK4 316 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 A0A1W2PPE3 182 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 SRIP30626 198 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 AKAP6Q13023 2319 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 TRA2AQ13595 282 aaKnown RBP eCLIP9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 PARLQ9H300 379 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 ANK1P16157 1881 aa9.32□□□□□ -0.92
PKNOX1-201ENST00000291547 REG1BP48304 166 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 SMAGPQ0VAQ4 97 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 NUDT10Q8NFP7 164 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 ST6GALNAC2Q9UJ37 374 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 MRPS18BQ9Y676 258 aaKnown RBP9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 ZFC3H1O60293 1989 aaKnown RBP9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 RTTNQ86VV8 2226 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 PCM1Q15154 2024 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 NPIPB6E9PJ23 425 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 PLAUP00749 431 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 RTP5Q14D33 572 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 ECSCRQ19T08 205 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 ZAR1Q86SH2 424 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 TMEM183AQ8IXX5 376 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 C10orf111Q8N326 155 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 OR8B2Q96RD0 313 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 RASL10BQ96S79 203 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 P2RX4Q99571 388 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 SCNM1Q9BWG6 230 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 RAXQ9Y2V3 346 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 SIRT4Q9Y6E7 314 aaPredicted RBP9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 CD3EP07766 207 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 SSTR5P35346 364 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 ZFP36L2P47974 494 aaKnown RBP9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 ANKRD39Q53RE8 183 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 VAX1Q5SQQ9 334 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 TMEM78Q5T7P6 136 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 TMEM136Q6ZRR5 245 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 ZNF441Q8N8Z8 693 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 A0A1W2PQD3 144 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 PGPA6NDG6 321 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 FCGR3AP08637 254 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 HOXC4P09017 264 aaPredicted RBP9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 LINC00869P0C866 280 aa9.31□□□□□ -0.92
PKNOX1-201ENST00000291547 TRGC1P0CF51 173 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms