RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MAFAQ8NHW3 353 aaPredicted RBP13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 CD74P04233 296 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 HIST1H1EP10412 219 aaKnown RBP13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 EFNB1P98172 346 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 ZNF501Q96CX3 271 aaPredicted RBP13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 SGK494Q96LW2 274 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 TTTY12Q9BZ98 90 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 SAP30LQ9HAJ7 183 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 TRAV14DV4A0A0A6YYC5 116 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 PLP1P60201 277 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 CTAG1AP78358 180 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 COX19Q49B96 90 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 IBA57Q5T440 356 aaKnown RBP13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 EIF4E3Q8N5X7 224 aaKnown RBP13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 LEAP2Q969E1 77 aa13.22□□□□□ -0.29
SHROOM4-201ENST00000289292 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 A8MXK9 166 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 GLIPR1P48060 266 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 HTN1P15515 57 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 LINC00469Q8N7U9 141 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 PIPOXQ9P0Z9 390 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 IGHV3-72A0A0B4J1Y9 119 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 GZMHP20718 246 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 PRDX2P32119 198 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 RTP5Q14D33 572 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 TWIST1Q15672 202 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 ST6GALNAC3Q8NDV1 305 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 RNF7Q9UBF6 113 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 IL19Q9UHD0 177 aa13.21□□□□□ -0.29
SHROOM4-201ENST00000289292 CRYABP02511 175 aaKnown RBP13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 UNC119Q13432 240 aa13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 LYRM7Q5U5X0 104 aa13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 C1QL2Q7Z5L3 287 aa13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 PGLYRP4Q96LB8 373 aa13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 UQCR10Q9UDW1 63 aa13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 AMMECR1Q9Y4X0 333 aaPredicted RBP13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 FGFRL1Q8N441 504 aa13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 NEUROG3Q9Y4Z2 214 aa13.21□□□□□ -0.3
SHROOM4-201ENST00000289292 CD8AP01732 235 aa13.2□□□□□ -0.3
SHROOM4-201ENST00000289292 SRXN1Q9BYN0 137 aa13.2□□□□□ -0.3
SHROOM4-201ENST00000289292 WIPI2Q9Y4P8 454 aa13.2□□□□□ -0.3
SHROOM4-201ENST00000289292 RELBQ01201 579 aa13.2□□□□□ -0.3
SHROOM4-201ENST00000289292 IGHV1-45A0A0A0MS14 117 aa13.2□□□□□ -0.3
SHROOM4-201ENST00000289292 ZNF716A6NP11 495 aa13.2□□□□□ -0.3
SHROOM4-201ENST00000289292 IER2Q9BTL4 223 aa13.2□□□□□ -0.3
SHROOM4-201ENST00000289292 NYNRINQ9P2P1 1898 aaKnown RBP13.2□□□□□ -0.3
SHROOM4-201ENST00000289292 CLDN18P56856 261 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 ZBTB34Q8NCN2 500 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 SPSB2Q99619 263 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 NPVFQ9HCQ7 196 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 PDCD11Q14690 1871 aaKnown RBP13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 SIPA1L1O43166 1804 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 HPRT1P00492 218 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 ASPHD2Q6ICH7 369 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 VSTM2AQ8TAG5 236 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 Q96M66 194 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 PARLQ9H300 379 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 KCNMB2Q9Y691 235 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 H3BTX0 84 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 SMIM10L1P0DMW3 83 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 FBXW9Q5XUX1 488 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 SMIM10Q96HG1 83 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 NUDT16L1Q9BRJ7 211 aaKnown RBP13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 ZFP30Q9Y2G7 519 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 IGKV1D-43A0A0B4J1Z2 117 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 S1PR2O95136 353 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 OR8B3Q8NGG8 313 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 CCL13Q99616 98 aa13.19□□□□□ -0.3
SHROOM4-201ENST00000289292 OR2T8A6NH00 312 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 KLF4O43474 513 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 AGAP20933 346 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 TEX30Q5JUR7 227 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 DNLZQ5SXM8 178 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 C19orf48Q6RUI8 117 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 C1orf210Q8IVY1 113 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 F11RQ9Y624 299 aaKnown RBP13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 LRRC37AA6NMS7 1700 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 OR4A8P0C604 315 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 ZDHHC16Q969W1 377 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 ADAM11O75078 769 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 DOLPP1Q86YN1 238 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 KNL1Q8NG31 2342 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 SSTR5P35346 364 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 HCP5Q6MZN7 132 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 LNP1A1A4G5 178 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 TMEM14DPA8MWL7 114 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 SRIP30626 198 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 RPL30P62888 115 aaKnown RBP13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 ERASQ7Z444 233 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 INSIG2Q9Y5U4 225 aa13.18□□□□□ -0.3
SHROOM4-201ENST00000289292 CEACAM18A8MTB9 384 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 DLL3Q9NYJ7 618 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 HIGD1AQ9Y241 93 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 LDLRAD4O15165 306 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 AMY1AP04745 511 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 TMEM183AQ8IXX5 376 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms