RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 SPICQ8N5J4 248 aa10.91□□□□□ -0.66
ACER3-201ENST00000278544 RANBP3Q9H6Z4 567 aaPredicted RBP10.91□□□□□ -0.66
ACER3-201ENST00000278544 OPN1MWP04001 364 aa10.91□□□□□ -0.66
ACER3-201ENST00000278544 OPN1MW2P0DN77 364 aa10.91□□□□□ -0.66
ACER3-201ENST00000278544 OPN1MW3P0DN78 364 aa10.91□□□□□ -0.66
ACER3-201ENST00000278544 MECP2P51608 486 aaKnown RBP10.91□□□□□ -0.66
ACER3-201ENST00000278544 MRPS11P82912 194 aaKnown RBP10.91□□□□□ -0.66
ACER3-201ENST00000278544 SURF2Q15527 256 aaPredicted RBP10.91□□□□□ -0.66
ACER3-201ENST00000278544 OR5M8Q8NGP6 311 aa10.91□□□□□ -0.66
ACER3-201ENST00000278544 GAL3ST2Q9H3Q3 398 aa10.91□□□□□ -0.66
ACER3-201ENST00000278544 LOC105371242A0A075B767 164 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 CGB3P0DN86 165 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 CGB7P0DN87 165 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 LPAR6P43657 344 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 RAB32Q13637 225 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 ABHD12Q8N2K0 398 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 IFI27L2Q9H2X8 130 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 PATZ1Q9HBE1 687 aaKnown RBP10.9□□□□□ -0.66
ACER3-201ENST00000278544 MIOXQ9UGB7 285 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 HILPDAQ9Y5L2 63 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 H7C2Y5 167 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 OVOL3O00110 214 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 S1PR2O95136 353 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 S100GP29377 79 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 DHODHQ02127 395 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 CLEC2AQ6UVW9 174 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 LIAT1Q6ZQX7 453 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 ZNF645Q8N7E2 425 aa10.9□□□□□ -0.66
ACER3-201ENST00000278544 PCNPQ8WW12 178 aaKnown RBP10.9□□□□□ -0.66
ACER3-201ENST00000278544 MSI2Q96DH6 328 aaKnown RBP10.9□□□□□ -0.66
ACER3-201ENST00000278544 PAIP2BQ9ULR5 123 aaKnown RBP10.9□□□□□ -0.66
ACER3-201ENST00000278544 ZNF729A6NN14 1252 aaPredicted RBP10.89□□□□□ -0.67
ACER3-201ENST00000278544 H3BP45 60 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 OR2F2O95006 317 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 HNF4GQ14541 408 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 LPCAT3Q6P1A2 487 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 COMMD9Q9P000 198 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 FAM157AC9JC47 383 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 NDUFA2O43678 99 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 ENSAO43768 121 aaKnown RBP10.89□□□□□ -0.67
ACER3-201ENST00000278544 IFNA21P01568 189 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 TMEM222Q9H0R3 208 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 NPIPB11E5RHQ5 1161 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 G3V3Q6 166 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 CRYZL1O95825 349 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 ERP29P30040 261 aaKnown RBP10.89□□□□□ -0.67
ACER3-201ENST00000278544 UCP3P55916 312 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 SRSF7Q16629 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
ACER3-201ENST00000278544 EDARADDQ8WWZ3 215 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 MBD2Q9UBB5 411 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 JPT1Q9UK76 154 aa10.89□□□□□ -0.67
ACER3-201ENST00000278544 IGKV1-39P01597 117 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 IGKV1D-39P04432 117 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 IGHV1-8P0DP01 117 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 HTD2P86397 168 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 TMEM155Q4W5P6 130 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 CXorf66Q5JRM2 361 aaPredicted RBP10.88□□□□□ -0.67
ACER3-201ENST00000278544 LGI3Q8N145 548 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 C22orf15Q8WYQ4 148 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 KAAG1Q9UBP8 84 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 F2RL2O00254 374 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 ECI1P42126 302 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 PDLIM4P50479 330 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 ZNF585BQ52M93 769 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 HEPN1Q6WQI6 88 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 SELENOHQ8IZQ5 122 aaKnown RBP10.88□□□□□ -0.67
ACER3-201ENST00000278544 C11orf42Q8N5U0 333 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 BVESQ8NE79 360 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 OR5AC2Q9NZP5 309 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 GZMKP49863 264 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 BRWD1-AS2P59051 145 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 OR2B8PP59922 312 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 FAHD2BQ6P2I3 314 aaPredicted RBP10.88□□□□□ -0.67
ACER3-201ENST00000278544 Q6ZRM9 215 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 C17orf50Q8WW18 174 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 FAHD2AQ96GK7 314 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 ZC4H2Q9NQZ6 224 aa10.88□□□□□ -0.67
ACER3-201ENST00000278544 TOR1AO14656 332 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 HINT2Q9BX68 163 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 SMIM3Q9BZL3 60 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 YPEL1O60688 119 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 RGS11O94810 467 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 IGKV1-16P04430 117 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 MYOD1P15172 320 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 TRAT1Q6PIZ9 186 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 RRNAD1Q96FB5 475 aaKnown RBP10.87□□□□□ -0.67
ACER3-201ENST00000278544 YPEL2Q96QA6 119 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 MRPL20Q9BYC9 149 aaKnown RBP10.87□□□□□ -0.67
ACER3-201ENST00000278544 APELAP0DMC3 54 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 RAB13P51153 203 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 POLR2GP62487 172 aaKnown RBP eCLIP10.87□□□□□ -0.67
ACER3-201ENST00000278544 CLEC12BQ2HXU8 276 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 TCTE3Q8IZS6 198 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 DMBX1Q8NFW5 382 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 DCUN1D4Q92564 292 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 CACNG5Q9UF02 275 aa10.87□□□□□ -0.67
ACER3-201ENST00000278544 SETXQ7Z333 2677 aaKnown RBP10.86□□□□□ -0.67
ACER3-201ENST00000278544 TRAV14DV4A0A0A6YYC5 116 aa10.86□□□□□ -0.67
ACER3-201ENST00000278544 KIAA1324LA8MWY0 1029 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms