RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 K7ESM1 405 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 F2RL2O00254 374 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SERPINE2P07093 398 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SRFP11831 508 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 CPMP14384 443 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 PGCP20142 388 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 VDAC1P21796 283 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 CD1BP29016 333 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SSTR5P35346 364 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 TMEM249Q2WGJ8 235 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 PLCXD3Q63HM9 321 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 CBLN3Q6UW01 205 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SPATA12Q7Z6I5 190 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SHISA5Q8N114 240 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 ABHD14BQ96IU4 210 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 DAPP1Q9UN19 280 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 MYO9BQ13459 2157 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 TRBV7-9A0A0J9YWB2 115 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 C3orf85A0A1B0GTC6 90 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 PRSS37A4D1T9 235 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 OTOL1A6NHN0 477 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-201ENST00000274071 OR11H12B2RN74 326 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 PDE6DO43924 150 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 NAPSAO96009 420 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 CLEC3BP05452 202 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 THBS3P49746 956 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 RAB30Q15771 203 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 TBR1Q16650 682 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SLC25A34Q6PIV7 304 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 OR11H1Q8NG94 326 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 OR2K2Q8NGT1 345 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 OR2A1Q8NGT9 310 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 OR11H2Q8NH07 326 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 NUS1Q96E22 293 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SPIN2AQ99865 258 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SPIN2BQ9BPZ2 258 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 COMMD5Q9GZQ3 224 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 JKAMPQ9P055 326 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 ERRFI1Q9UJM3 462 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-201ENST00000274071 EDDM13A0A1B0GTR0 161 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 MDFIC2A0A1B0GVS7 189 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 C11orf98E9PRG8 122 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 NDUFB4O95168 129 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 OTX2P32243 289 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 GNB1P62873 340 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 ARL16Q0P5N6 197 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 DCAF12Q5T6F0 453 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 LINC00346Q8IVM7 164 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF695Q8IW36 515 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 TMEM222Q9H0R3 208 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 SLC25A22Q9H936 323 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 CENPMQ9NSP4 180 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 NECAP2Q9NVZ3 263 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 NAT8BQ9UHF3 227 aa7.83□□□□□ -1.16
PDGFC-201ENST00000274071 ATG2BQ96BY7 2078 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 KIAA1549Q9HCM3 1950 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 TMEM189A5PLL7 270 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 C9orf118A6NHY6 69 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 SLC22A20A6NK97 555 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 C11orf94C9JXX5 98 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 H3BUT2 72 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 SLC17A3O00476 420 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF207O43670 478 aaKnown RBP7.82□□□□□ -1.16
PDGFC-201ENST00000274071 MGAT2Q10469 447 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 LRRC75BQ2VPJ9 315 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF295-AS1Q8N0V1 137 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 SCCPDHQ8NBX0 429 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 OR10G3Q8NGC4 313 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 OR8B3Q8NGG8 313 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 OR10G8Q8NGN5 311 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 OR8B2Q96RD0 313 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 FAM110AQ9BQ89 295 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 NAA38Q9BRA0 125 aaKnown RBP7.82□□□□□ -1.16
PDGFC-201ENST00000274071 QTRT1Q9BXR0 403 aaKnown RBP7.82□□□□□ -1.16
PDGFC-201ENST00000274071 GNB1LQ9BYB4 327 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 LINC00470Q9BZP3 86 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 GP6Q9HCN6 339 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 DEC1Q9P2X7 70 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 PSG8Q9UQ74 426 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 TRBV20OR9-2A0A075B6H5 130 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 FAM181BA6NEQ2 426 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 CRYAAP02489 173 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 CT62P0C5K7 136 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 LGALS4P56470 323 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF525Q8N782 197 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 ZNF439Q8NDP4 499 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 VN1R2Q8NFZ6 395 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 NAT6Q93015 286 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 AP1S3Q96PC3 154 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 SPATA25Q9BR10 227 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 HINT2Q9BX68 163 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 PNRC2Q9NPJ4 139 aaKnown RBP7.82□□□□□ -1.16
PDGFC-201ENST00000274071 TMEM74BQ9NUR3 256 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 FAM206AQ9NX38 181 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 IL36BQ9NZH7 164 aa7.82□□□□□ -1.16
PDGFC-201ENST00000274071 COA3Q9Y2R0 106 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-201ENST00000274071 TDRD6O60522 2096 aaKnown RBP7.81□□□□□ -1.16
PDGFC-201ENST00000274071 TRAV9-1A0A075B6T8 112 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 C2orf70A6NJV1 201 aa7.81□□□□□ -1.16
PDGFC-201ENST00000274071 PRNPP04156 253 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms