RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 SLC25A47Q6Q0C1 308 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 NEIL1Q96FI4 390 aaPredicted RBP10.92□□□□□ -0.66
HERC6-202ENST00000273960 GPR27Q9NS67 375 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 LAMTOR2Q9Y2Q5 125 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 A0A1W2PR77 199 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 RBFOX2O43251 390 aaKnown RBP eCLIP10.92□□□□□ -0.66
HERC6-202ENST00000273960 TLX3O43711 291 aaPredicted RBP10.92□□□□□ -0.66
HERC6-202ENST00000273960 KRASP01116 189 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 HBG1P69891 147 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 HBG2P69892 147 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 LDLRAD2Q5SZI1 272 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 SPEM1Q8N4L4 309 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 CDX2Q99626 313 aaPredicted RBP10.92□□□□□ -0.66
HERC6-202ENST00000273960 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
HERC6-202ENST00000273960 AKIRIN1Q9H9L7 192 aaPredicted RBP10.92□□□□□ -0.66
HERC6-202ENST00000273960 LOC102725191A0A1B0GVB3 256 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.92□□□□□ -0.66
HERC6-202ENST00000273960 RABEPKQ7Z6M1 372 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 MAFAQ8NHW3 353 aaPredicted RBP10.92□□□□□ -0.66
HERC6-202ENST00000273960 OIT3Q8WWZ8 545 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 P2RX4Q99571 388 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 TWSG1Q9GZX9 223 aa10.92□□□□□ -0.66
HERC6-202ENST00000273960 SNURFLB1AK76 121 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 ULBP2Q9BZM5 246 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 TP53TG3Q9ULZ0 132 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 WIPI2Q9Y4P8 454 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 A0A1B0GX78 115 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 AQP7P3A6NL99 342 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 NXPH2O95156 264 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 BCL3P20749 454 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 OTX1P32242 354 aaPredicted RBP10.91□□□□□ -0.66
HERC6-202ENST00000273960 CFHR1Q03591 330 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 SHBQ15464 509 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 MBD3L1Q8WWY6 194 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 SPTSSAQ969W0 71 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 TMEM56Q96MV1 263 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 WDR61Q9GZS3 305 aaKnown RBP10.91□□□□□ -0.66
HERC6-202ENST00000273960 RARRES3Q9UL19 164 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 TBL2Q9Y4P3 447 aaKnown RBP10.91□□□□□ -0.66
HERC6-202ENST00000273960 PXMP4Q9Y6I8 212 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 TMEM56-RWDD3S4R434 201 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 FER1L5A0AVI2 2057 aa10.91□□□□□ -0.66
HERC6-202ENST00000273960 TRAV1-1A0A0B4J248 108 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 LILRA5A6NI73 299 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 F6UZH7 168 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 NPIPA3F8WFD2 350 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 TIAF1O95411 115 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 TDGF1P13385 188 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 GLB1P16278 677 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 ZP4Q12836 540 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 AARDQ4LEZ3 155 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 ZNF596Q8TC21 504 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 ANAPC16Q96DE5 110 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 PTRH2Q9Y3E5 179 aaKnown RBP10.9□□□□□ -0.66
HERC6-202ENST00000273960 RPL15P61313 204 aaKnown RBP10.9□□□□□ -0.66
HERC6-202ENST00000273960 RELBQ01201 579 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 DEFB123Q8N688 67 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 ADPRHL1Q8NDY3 354 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 UHRF2Q96PU4 802 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 OR1A1Q9P1Q5 309 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 ATP23Q9Y6H3 246 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 MUC22E2RYF6 1773 aaPredicted RBP10.9□□□□□ -0.66
HERC6-202ENST00000273960 CCL1P22362 96 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 SOX8P57073 446 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 CCL7P80098 99 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 ZNF816Q0VGE8 651 aaPredicted RBP10.9□□□□□ -0.66
HERC6-202ENST00000273960 LRRC75BQ2VPJ9 315 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 SP5Q6BEB4 398 aaPredicted RBP10.9□□□□□ -0.66
HERC6-202ENST00000273960 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 ZNF808Q8N4W9 903 aaPredicted RBP10.9□□□□□ -0.66
HERC6-202ENST00000273960 C20orf144Q9BQM9 153 aa10.9□□□□□ -0.66
HERC6-202ENST00000273960 NKX6-3A6NJ46 265 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 F2RP25116 425 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 GPM6AP51674 278 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 GNB1P62873 340 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 CNN3Q15417 329 aaKnown RBP10.89□□□□□ -0.67
HERC6-202ENST00000273960 ATP6V1FQ16864 119 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 RAET1LQ5VY80 246 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 ZNF586Q9NXT0 402 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 THADAQ6YHU6 1953 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 FREM1Q5H8C1 2179 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 IGKV1-6A0A0C4DH72 117 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 A0A1W2PQD3 144 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 RIPPLY3P57055 190 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 LINC00310P59036 64 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 PSG4Q00888 419 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 HLA-DRB5Q30154 266 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 FAM53AQ6NSI3 398 aaPredicted RBP10.89□□□□□ -0.67
HERC6-202ENST00000273960 PLPPR2Q96GM1 343 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 LOXL4Q96JB6 756 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 H0Y8G0 127 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 HYPMO75409 117 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 UCP1P25874 307 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 RBM11P57052 281 aaKnown RBP10.89□□□□□ -0.67
HERC6-202ENST00000273960 KRTCAP3Q53RY4 240 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 TEX43Q6ZNM6 134 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 C20orf204Q6ZNR8 217 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 ST8SIA1Q92185 356 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 ZDHHC16Q969W1 377 aa10.89□□□□□ -0.67
HERC6-202ENST00000273960 RAB40CQ96S21 281 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms