RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 GABPB1Q06547 395 aaPredicted RBP6.85□□□□□ -1.31
TPM3-201ENST00000271850 MRGPRG-AS1Q2M3A8 158 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 ZNF660Q6AZW8 331 aaPredicted RBP6.85□□□□□ -1.31
TPM3-201ENST00000271850 FAM71F2Q6NXP2 309 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 TMEM65Q6PI78 240 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 CD200R1LQ6Q8B3 271 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 IL34Q6ZMJ4 242 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 ZNF383Q8NA42 475 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 OR5AN1Q8NGI8 311 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 C5orf30Q96GV9 206 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 MS4A10Q96PG2 267 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 CITED4Q96RK1 184 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 UQCC2Q9BRT2 126 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 THAP7Q9BT49 309 aaPredicted RBP6.85□□□□□ -1.31
TPM3-201ENST00000271850 TM2D1Q9BX74 207 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 FKBP14Q9NWM8 211 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 KIAA1456Q9P272 454 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 CKLFQ9UBR5 152 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 ADAM30Q9UKF2 790 aa6.85□□□□□ -1.31
TPM3-201ENST00000271850 FOXA2Q9Y261 457 aaPredicted RBP6.85□□□□□ -1.31
TPM3-201ENST00000271850 EFCAB10A6NFE3 127 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 CA2P00918 260 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 IGLV1-51P01701 117 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 PLA2G7Q13093 441 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 PSG5Q15238 335 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 ZNF124Q15973 351 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 SRSF7Q16629 238 aaKnown RBP eCLIP6.84□□□□□ -1.313e-11■■■■□ 20.4
TPM3-201ENST00000271850 C1orf100Q5SVJ3 147 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 ZFAND6Q6FIF0 208 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 NANOGP1Q8N7R0 232 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 NKAIN3Q8N8D7 197 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 DRAXINQ8NBI3 349 aaPredicted RBP6.84□□□□□ -1.31
TPM3-201ENST00000271850 ZNF555Q8NEP9 628 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 LFNGQ8NES3 379 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 OR2AK2Q8NG84 335 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 CYGBQ8WWM9 190 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 IL1F10Q8WWZ1 152 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 GALMQ96C23 342 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 CLCC1Q96S66 551 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 C11orf54Q9H0W9 315 aaPredicted RBP6.84□□□□□ -1.31
TPM3-201ENST00000271850 KCNIP1Q9NZI2 227 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 CNOT2Q9NZN8 540 aaKnown RBP6.84□□□□□ -1.31
TPM3-201ENST00000271850 SLC23A1Q9UHI7 598 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 PSORS1C1Q9UIG5 152 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 LSM2Q9Y333 95 aaKnown RBP6.84□□□□□ -1.31
TPM3-201ENST00000271850 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.31
TPM3-201ENST00000271850 TNCP24821 2201 aa6.84□□□□□ -1.32
TPM3-201ENST00000271850 KMT2AQ03164 3969 aa6.84□□□□□ -1.32
TPM3-201ENST00000271850 TRBV6-6A0A0A6YYG2 114 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 IRGMA1A4Y4 181 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 OR5H14A6NHG9 310 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 A8MZ25 164 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 RAB29O14966 203 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 SLC22A1O15245 554 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 SOCS1O15524 211 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 IGLV2-23P01705 113 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 TRBV12-3P01733 135 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 HSPB1P04792 205 aaKnown RBP6.83□□□□□ -1.32
TPM3-201ENST00000271850 CRYGBP07316 175 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 SCTP09683 121 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 OR8U9P0C7N5 309 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 TMEM50BP56557 158 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 WNT4P56705 351 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 PJVKQ0ZLH3 352 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 AKIRIN2Q53H80 203 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 UNQ5815/PRO19632Q6UWF5 114 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 ADAMTSL5Q6ZMM2 481 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 AHSA2Q719I0 299 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 PPP1R27Q86WC6 154 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 CST11Q9H112 138 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 LPAR5Q9H1C0 372 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 RAB9BQ9NP90 201 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 GHRLQ9UBU3 117 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 AK3Q9UIJ7 227 aa6.83□□□□□ -1.32
TPM3-201ENST00000271850 ITGB1BP1O14713 200 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 RGS11O94810 467 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 LYL1P12980 280 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 TPPP2P59282 170 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 TAS2R43P59537 309 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 HLA-DRB3P79483 266 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 ACSM3Q53FZ2 586 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 ACTBL2Q562R1 376 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 ZNF562Q6V9R5 426 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 TCTEX1D1Q8N7M0 179 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 OR6Q1Q8NGQ2 317 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 PTX4Q96A99 478 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 TMEM59Q9BXS4 323 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 PLCXD1Q9NUJ7 323 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 PIPOXQ9P0Z9 390 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 METTL1Q9UBP6 276 aaKnown RBP6.82□□□□□ -1.32
TPM3-201ENST00000271850 RNF150Q9ULK6 438 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 WASHC3Q9Y3C0 194 aa6.82□□□□□ -1.32
TPM3-201ENST00000271850 IZUMO1RA6ND01 250 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 SRRM4A7MD48 611 aaKnown RBP6.81□□□□□ -1.32
TPM3-201ENST00000271850 HSPA12AO43301 675 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 CD3GP09693 182 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 UCHL1P09936 223 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 PITPNAQ00169 270 aa6.81□□□□□ -1.32
TPM3-201ENST00000271850 KLF5Q13887 457 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms