RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 C15orf40Q8WUR7 153 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 FCAMRQ8WWV6 532 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 SDHAF2Q9NX18 166 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 EHFQ9NZC4 300 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 MTFP1Q9UDX5 166 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 PITPNC1Q9UKF7 332 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 COL6A5A8TX70 2615 aa10.2□□□□□ -0.78
SS18-202ENST00000269138 TMEM89A2RUT3 159 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 GABARAPH6UMI1 98 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 M0QYG6 137 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 M0R1X1 148 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 TXNL1O43396 289 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 RBBP9O75884 186 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 TMEM11P17152 192 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 CD1BP29016 333 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 S100A5P33763 92 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 LUMP51884 338 aaPredicted RBP10.19□□□□□ -0.78
SS18-202ENST00000269138 TAS2R46P59540 309 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 EBI3Q14213 229 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 FAM71F2Q6NXP2 309 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 FAM131AQ6UXB0 335 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 LIAT1Q6ZQX7 453 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 Q6ZSV7 163 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 CCDC190Q86UF4 302 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 EAF1Q96JC9 268 aaPredicted RBP10.19□□□□□ -0.78
SS18-202ENST00000269138 RITA1Q96K30 269 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 RBM14Q96PK6 669 aaKnown RBP10.19□□□□□ -0.78
SS18-202ENST00000269138 SLC25A33Q9BSK2 321 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 GHITMQ9H3K2 345 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 V9GYH0 126 aa10.19□□□□□ -0.78
SS18-202ENST00000269138 SH2D7A6NKC9 451 aaPredicted RBP10.18□□□□□ -0.78
SS18-202ENST00000269138 CTDSPLO15194 276 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 OR2F2O95006 317 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 RAG2P55895 527 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 BLCAPP62952 87 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 DYRK1AQ13627 763 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 CNPY1Q3B7I2 92 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 ZNF660Q6AZW8 331 aaPredicted RBP10.18□□□□□ -0.78
SS18-202ENST00000269138 Q6ZS46 218 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 Q8N6K4 173 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 ZNF383Q8NA42 475 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.18□□□□□ -0.78
SS18-202ENST00000269138 SMIM4Q8WVI0 70 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 GIMAP1Q8WWP7 306 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 RAB18Q9NP72 206 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 GAB2Q9UQC2 676 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 SIGLEC9Q9Y336 463 aa10.18□□□□□ -0.78
SS18-202ENST00000269138 H0YJW9 148 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 NDUFA7O95182 113 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 MOSP00540 346 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 PPYP01298 95 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 CD3DP04234 171 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 AMY1AP04745 511 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 AMY2AP04746 511 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 MDKP21741 143 aaPredicted RBP10.17□□□□□ -0.78
SS18-202ENST00000269138 FXYD4P59646 89 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 RPL15P61313 204 aaKnown RBP10.17□□□□□ -0.78
SS18-202ENST00000269138 MRPS10P82664 201 aaKnown RBP10.17□□□□□ -0.78
SS18-202ENST00000269138 DHRS11Q6UWP2 260 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 OR2T10Q8NGZ9 312 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 SECTM1Q8WVN6 248 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 ZNF2Q9BSG1 426 aaPredicted RBP10.17□□□□□ -0.78
SS18-202ENST00000269138 TINAGL1Q9GZM7 467 aaPredicted RBP10.17□□□□□ -0.78
SS18-202ENST00000269138 CCL28Q9NRJ3 127 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 RABL2AQ9UBK7 228 aaPredicted RBP10.17□□□□□ -0.78
SS18-202ENST00000269138 RABL2BQ9UNT1 228 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 GSTZ1O43708 216 aaPredicted RBP10.17□□□□□ -0.78
SS18-202ENST00000269138 TSPAN9O75954 239 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 F2RL1P55085 397 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 ACTBP60709 375 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 ZNF79Q15937 498 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 PYDC2Q56P42 97 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 ZNF645Q8N7E2 425 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 TMEM229BQ8NBD8 167 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 OR4D10Q8NGI6 311 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 OR5AN1Q8NGI8 311 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 GPHA2Q96T91 129 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 NPFFR1Q9GZQ6 430 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 SLC5A7Q9GZV3 580 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 ZNF702PQ9H963 129 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 PLSCR3Q9NRY6 295 aa10.17□□□□□ -0.78
SS18-202ENST00000269138 RBMX2Q9Y388 322 aaKnown RBP10.17□□□□□ -0.78
SS18-202ENST00000269138 CNTFRP26992 372 aa10.16□□□□□ -0.78
SS18-202ENST00000269138 AWAT1Q58HT5 328 aa10.16□□□□□ -0.78
SS18-202ENST00000269138 C16orf82Q7Z2V1 217 aa10.16□□□□□ -0.78
SS18-202ENST00000269138 TMEM17Q86X19 198 aa10.16□□□□□ -0.78
SS18-202ENST00000269138 OR4F5Q8NH21 305 aa10.16□□□□□ -0.78
SS18-202ENST00000269138 LINC01006Q8NI28 216 aa10.16□□□□□ -0.78
SS18-202ENST00000269138 BATF3Q9NR55 127 aa10.16□□□□□ -0.78
SS18-202ENST00000269138 MOB4Q9Y3A3 225 aa10.16□□□□□ -0.78
SS18-202ENST00000269138 OR5H14A6NHG9 310 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 NCBP2LA6PVI3 153 aaKnown RBP10.15□□□□□ -0.78
SS18-202ENST00000269138 LINC00473A8K010 186 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 H7C2Y5 167 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 CD74P04233 296 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 DUTP33316 252 aaKnown RBP10.15□□□□□ -0.78
SS18-202ENST00000269138 ETV6P41212 452 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 HERV-K104P61576 105 aa10.15□□□□□ -0.78
SS18-202ENST00000269138 TSPAN5P62079 268 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms