RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 TMEM56Q96MV1 263 aa17.08■□□□□ 0.33
LYSMD2-201ENST00000267838 LSM5Q9Y4Y9 91 aaKnown RBP17.08■□□□□ 0.33
LYSMD2-201ENST00000267838 TMEM56-RWDD3S4R434 201 aa17.08■□□□□ 0.33
LYSMD2-201ENST00000267838 HIVEP3Q5T1R4 2406 aa17.08■□□□□ 0.32
LYSMD2-201ENST00000267838 RELNP78509 3460 aa17.08■□□□□ 0.32
LYSMD2-201ENST00000267838 BORCS7-ASMTA0A0B4J1R7 106 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 H0Y980 276 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 FBXO24O75426 580 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 F2RP25116 425 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 PPP1CCP36873 323 aaKnown RBP17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 FAM53AQ6NSI3 398 aaPredicted RBP17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 TMEM88Q6PEY1 159 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 TMEM231Q9H6L2 316 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 ANKHD1Q8IWZ3 2542 aaKnown RBP17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 IGHV3-43A0A0B4J1X8 118 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 IGHV1-69-2A0A0G2JMI3 117 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 CD5P06127 495 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 IGHV3-43DP0DP04 118 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 UCP1P25874 307 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 DVL1P1P54792 670 aaPredicted RBP17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 TMEM33P57088 247 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 CBLN2Q8IUK8 224 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 SLC35G3Q8N808 338 aa17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 FAM212BQ9NTI7 297 aaPredicted RBP17.07■□□□□ 0.32
LYSMD2-201ENST00000267838 TMPRSS2O15393 492 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 WNT2P09544 360 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 SFTA3P0C7M3 94 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 GPR157Q5UAW9 335 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 ZNF695Q8IW36 515 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 SELENOHQ8IZQ5 122 aaKnown RBP17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 DRAM1Q8N682 238 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 ZNF645Q8N7E2 425 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 ARV1Q9H2C2 271 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 TMED3Q9Y3Q3 217 aa17.06■□□□□ 0.32
LYSMD2-201ENST00000267838 PKDREJQ9NTG1 2253 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 GPR137BO60478 399 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 CDS2O95674 445 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 NPBWR1P48145 328 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 PPOXP50336 477 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 Q6ZRG5 221 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 LINC00518Q8N0U6 118 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 OR51H1Q8NH63 302 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 LYPD6BQ8NI32 183 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 OR2D2Q9H210 308 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 CALYQ9NYX4 217 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 FAM96BQ9Y3D0 163 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 F2RL2O00254 374 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 SCGB1D2O95969 90 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 SEC11BP0C7V7 166 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 CGB3P0DN86 165 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 CGB7P0DN87 165 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 LTC4SQ16873 150 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 SAV1Q9H4B6 383 aaPredicted RBP17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 JPT1Q9UK76 154 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 RNF150Q9ULK6 438 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 KPTNQ9Y664 436 aa17.05■□□□□ 0.32
LYSMD2-201ENST00000267838 TRGV10A0A0A0MS01 117 aa17.04■□□□□ 0.32
LYSMD2-201ENST00000267838 P2RY1P47900 373 aa17.04■□□□□ 0.32
LYSMD2-201ENST00000267838 ZBTB34Q8NCN2 500 aa17.04■□□□□ 0.32
LYSMD2-201ENST00000267838 RAB9BQ9NP90 201 aa17.04■□□□□ 0.32
LYSMD2-201ENST00000267838 DSCAML1Q8TD84 2053 aa17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 DUXBA0A1W2PPF3 345 aa17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 TNFRSF13BO14836 293 aaPredicted RBP17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 MBPP02686 304 aaPredicted RBP17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 HOXA1P49639 335 aaPredicted RBP17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 C17orf58Q2M2W7 97 aa17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 FAM219AQ8IW50 185 aa17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 IL22RA2Q969J5 263 aa17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 GNG12Q9UBI6 72 aa17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 SLC25A10Q9UBX3 287 aaPredicted RBP17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 ZFYVE26Q68DK2 2539 aa17.03■□□□□ 0.32
LYSMD2-201ENST00000267838 NDUFB7P17568 137 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 PAX6P26367 422 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 RAB5CP51148 216 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 RAB13P51153 203 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 MSMO1Q15800 293 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 AVPI1Q5T686 147 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 TCF23Q7RTU1 214 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 FGFRL1Q8N441 504 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 GINS3Q9BRX5 216 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 BIN3Q9NQY0 253 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 CBLN4Q9NTU7 201 aa17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 STRAPQ9Y3F4 350 aaKnown RBP17.02■□□□□ 0.32
LYSMD2-201ENST00000267838 KBTBD11-OT1A0A1B0GTJ5 212 aa17.02■□□□□ 0.31
LYSMD2-201ENST00000267838 YPEL1O60688 119 aa17.02■□□□□ 0.31
LYSMD2-201ENST00000267838 LOXL3P58215 753 aa17.02■□□□□ 0.31
LYSMD2-201ENST00000267838 MORN2Q502X0 79 aa17.02■□□□□ 0.31
LYSMD2-201ENST00000267838 EDARADDQ8WWZ3 215 aa17.02■□□□□ 0.31
LYSMD2-201ENST00000267838 YPEL2Q96QA6 119 aa17.02■□□□□ 0.31
LYSMD2-201ENST00000267838 LIN7CQ9NUP9 197 aaKnown RBP17.02■□□□□ 0.31
LYSMD2-201ENST00000267838 CLN8Q9UBY8 286 aa17.02■□□□□ 0.31
LYSMD2-201ENST00000267838 RNF212BA8MTL3 300 aa17.01■□□□□ 0.31
LYSMD2-201ENST00000267838 ADAM20O43506 726 aa17.01■□□□□ 0.31
LYSMD2-201ENST00000267838 TSPAN15O95858 294 aa17.01■□□□□ 0.31
LYSMD2-201ENST00000267838 SERPINE2P07093 398 aa17.01■□□□□ 0.31
LYSMD2-201ENST00000267838 OMGP23515 440 aa17.01■□□□□ 0.31
LYSMD2-201ENST00000267838 PEA15Q15121 130 aa17.01■□□□□ 0.31
LYSMD2-201ENST00000267838 CORO2AQ92828 525 aa17.01■□□□□ 0.31
LYSMD2-201ENST00000267838 C5orf30Q96GV9 206 aa17.01■□□□□ 0.31
LYSMD2-201ENST00000267838 SMIM3Q9BZL3 60 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms