RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 GLIPR1P48060 266 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 TLE4Q04727 773 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 ICAM4Q14773 271 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 FGFRL1Q8N441 504 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 LRRC29Q8WV35 223 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 NINJ1Q92982 152 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 STARD4Q96DR4 205 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 BIN3Q9NQY0 253 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 MMP24Q9Y5R2 645 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 SCAF4O95104 1147 aaKnown RBP10.8□□□□□ -0.68
CPSF6-201ENST00000266679 ARG1P05089 322 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 PAX6P26367 422 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 SSTR5P35346 364 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 HABP2Q14520 560 aaPredicted RBP10.8□□□□□ -0.68
CPSF6-201ENST00000266679 RHEBQ15382 184 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 SMIM21Q3B7S5 101 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 FAM180AQ6UWF9 173 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 LINC00518Q8N0U6 118 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 TCTEX1D2Q8WW35 142 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 RBKSQ9H477 322 aa10.8□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF71Q9NQZ8 489 aaPredicted RBP10.8□□□□□ -0.68
CPSF6-201ENST00000266679 AHRRA9YTQ3 701 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 S1PR2O95136 353 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 HBE1P02100 147 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 SRP19P09132 144 aaKnown RBP10.79□□□□□ -0.68
CPSF6-201ENST00000266679 FOLR2P14207 255 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 RAB2AP61019 212 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 EDDM3AQ14507 147 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 LTC4SQ16873 150 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 DPPA3Q6W0C5 159 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 OR2Z1Q8NG97 314 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 OR13A1Q8NGR1 328 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 RFESDQ8TAC1 157 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 PRR7Q8TB68 274 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 DCTN5Q9BTE1 182 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 VSIRQ9H7M9 311 aa10.79□□□□□ -0.68
CPSF6-201ENST00000266679 KLF2Q9Y5W3 355 aaPredicted RBP10.79□□□□□ -0.68
CPSF6-201ENST00000266679 HEATR1Q9H583 2144 aaKnown RBP10.79□□□□□ -0.68
CPSF6-201ENST00000266679 UBE2L5PA0A1B0GUS4 154 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 OR5H1A6NKK0 313 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF891A8MT65 544 aaPredicted RBP10.78□□□□□ -0.68
CPSF6-201ENST00000266679 C17orf98A8MV24 154 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 CLDN1O95832 211 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 KRASP01116 189 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 CGAP01215 116 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 EGR1P18146 543 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 PTAFRP25105 342 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 RAB5BP61020 215 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 UBE2KP61086 200 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 HBG1P69891 147 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 HBG2P69892 147 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 EIF4EBP1Q13541 118 aaPredicted RBP10.78□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF506Q5JVG8 444 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 MBNL2Q5VZF2 373 aaKnown RBP10.78□□□□□ -0.68
CPSF6-201ENST00000266679 SP5Q6BEB4 398 aaPredicted RBP10.78□□□□□ -0.68
CPSF6-201ENST00000266679 SEM1Q6ZVN7 128 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 ZBTB34Q8NCN2 500 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 CLDND2Q8NHS1 167 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 SMDT1Q9H4I9 107 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 UTP20O75691 2785 aaKnown RBP10.78□□□□□ -0.68
CPSF6-201ENST00000266679 hCG_1809904A0A1W2PP81 198 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 A0A1W2PR64 198 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 A0A1W2PRV1 198 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 DEFB108AA8MXU0 73 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 C1orf196B1AJZ1 125 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 ZNF83P51522 516 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 SLC38A11Q08AI6 406 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 CATR1Q13166 79 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 OR8G2PQ6IF36 304 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 LRP11Q86VZ4 500 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 ZADH2Q8N4Q0 377 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 CD177Q8N6Q3 437 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 CYB561D1Q8N8Q1 229 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 RBMXL1Q96E39 390 aaKnown RBP10.78□□□□□ -0.68
CPSF6-201ENST00000266679 EGLN1Q9GZT9 426 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 GNG13Q9P2W3 67 aa10.78□□□□□ -0.68
CPSF6-201ENST00000266679 ODAMA1E959 279 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 ST8SIA5O15466 376 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 MT-ND4LP03901 98 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 ELLP55199 621 aaPredicted RBP10.77□□□□□ -0.68
CPSF6-201ENST00000266679 TNFRSF9Q07011 255 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 MSMPQ1L6U9 139 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 Q3ZCU0 254 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 LCN15Q6UWW0 184 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 SSX7Q7RTT5 188 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 FAM24BQ8N5W8 94 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 RPRMQ9NS64 109 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 CLN8Q9UBY8 286 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 DUSP13Q9UII6 198 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 SLC25A15Q9Y619 301 aa10.77□□□□□ -0.68
CPSF6-201ENST00000266679 LOC102723971A0A1B0GUV8 181 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 FAM90A26D6RGX4 464 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 H3BQ15 152 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 J3QKU1 62 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 M0R1B8 84 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 TUBG1P23258 451 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 FGF8P55075 233 aaPredicted RBP10.77□□□□□ -0.69
CPSF6-201ENST00000266679 HNF4GQ14541 408 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 P2RY6Q15077 328 aa10.77□□□□□ -0.69
CPSF6-201ENST00000266679 MSMO1Q15800 293 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms