RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 M0QYG6 137 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 HSD17B6O14756 317 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 CD1BP29016 333 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 GNRHRP30968 328 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 LRRC75BQ2VPJ9 315 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 RNASE12Q5GAN4 147 aaKnown RBP11.48□□□□□ -0.57
SSBP1-201ENST00000265304 TMEM17Q86X19 198 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 BVESQ8NE79 360 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 OR5R1Q8NH85 324 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 SSMEM1Q8WWF3 244 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 C22orf15Q8WYQ4 148 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 BORCS5Q969J3 196 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 MRGPRFQ96AM1 343 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 RPEQ96AT9 228 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 C5orf30Q96GV9 206 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 NABP2Q9BQ15 211 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 C7orf50Q9BRJ6 194 aaKnown RBP11.48□□□□□ -0.57
SSBP1-201ENST00000265304 ZNF2Q9BSG1 426 aaPredicted RBP11.48□□□□□ -0.57
SSBP1-201ENST00000265304 SDHAF2Q9NX18 166 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 ZNF221Q9UK13 617 aa11.48□□□□□ -0.57
SSBP1-201ENST00000265304 OR5H14A6NHG9 310 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 BRS3P32247 399 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 GPR12P47775 334 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 TAGLNQ01995 201 aaKnown RBP11.47□□□□□ -0.57
SSBP1-201ENST00000265304 SURF2Q15527 256 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-201ENST00000265304 LPCAT3Q6P1A2 487 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 TGIF2LXQ8IUE1 241 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 TOMM5Q8N4H5 51 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 DRAM1Q8N682 238 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 DDB2Q92466 427 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 TOMM40LQ969M1 308 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 PRRT1Q99946 306 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 RSRP1Q9BUV0 290 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 OR2D2Q9H210 308 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 HRASLSQ9HDD0 168 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 RNF150Q9ULK6 438 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 HILPDAQ9Y5L2 63 aa11.47□□□□□ -0.57
SSBP1-201ENST00000265304 COL6A5A8TX70 2615 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 NAP1L6A6NFF2 107 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 PLA2G10O15496 165 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 IFNA6P05013 189 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 DUTP33316 252 aaKnown RBP11.46□□□□□ -0.57
SSBP1-201ENST00000265304 FAUP35544 74 aaKnown RBP11.46□□□□□ -0.57
SSBP1-201ENST00000265304 ECI1P42126 302 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 ARHGDIBP52566 201 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 RPL39P5Q59GN2 51 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 Q8N6K4 173 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 ZDHHC22Q8N966 263 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 OR13C8Q8NGS7 320 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 OR56B4Q8NH76 319 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
SSBP1-201ENST00000265304 ZNF486Q96H40 463 aaPredicted RBP11.46□□□□□ -0.57
SSBP1-201ENST00000265304 ADTRPQ96IZ2 230 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 SSX3Q99909 188 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 FXYD6Q9H0Q3 95 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 DPAGT1Q9H3H5 408 aa11.46□□□□□ -0.57
SSBP1-201ENST00000265304 MDFIC2A0A1B0GVS7 189 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 DISC1C4P0D8 188 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 TIMM23O14925 209 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 UPK1BO75841 260 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 AMY2AP04746 511 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 MC5RP33032 325 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 RPL15P61313 204 aaKnown RBP11.45□□□□□ -0.58
SSBP1-201ENST00000265304 HERV-K104P61576 105 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 TSPAN5P62079 268 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 TRIQKQ629K1 86 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 ZNF66Q6ZN08 573 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 LIAT1Q6ZQX7 453 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 ZNF383Q8NA42 475 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 OR51S1Q8NGJ8 323 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 JMJD8Q96S16 334 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 HSD17B10Q99714 261 aaKnown RBP11.45□□□□□ -0.58
SSBP1-201ENST00000265304 RNF5Q99942 180 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 MRPL20Q9BYC9 149 aaKnown RBP11.45□□□□□ -0.58
SSBP1-201ENST00000265304 SLC5A7Q9GZV3 580 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 ESM1Q9NQ30 184 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 CCL28Q9NRJ3 127 aa11.45□□□□□ -0.58
SSBP1-201ENST00000265304 A6NDX4 124 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 H0YJW9 148 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 VENTXO95231 258 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 IGHV4-59P01825 116 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 RND3P61587 244 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 SLC9A3R2Q15599 337 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 RBMS3Q6XE24 437 aaKnown RBP11.44□□□□□ -0.58
SSBP1-201ENST00000265304 ZNF818PQ6ZRF7 136 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 SLC38A6Q8IZM9 456 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 ZFAND2BQ8WV99 257 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 SLC25A21Q9BQT8 299 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-201ENST00000265304 FAM212BQ9NTI7 297 aaPredicted RBP11.44□□□□□ -0.58
SSBP1-201ENST00000265304 SCP2D1Q9UJQ7 156 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 GPR132Q9UNW8 380 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
SSBP1-201ENST00000265304 LINC00473A8K010 186 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms