RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 FCGR1BQ92637 280 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 DUX3Q96PT4 197 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 RNF5Q99942 180 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 MCRIP2Q9BUT9 160 aaKnown RBP12.57□□□□□ -0.4
USE1-201ENST00000263897 GPR61Q9BZJ8 451 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
USE1-201ENST00000263897 RDH8Q9NYR8 311 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 ZNF221Q9UK13 617 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 WASHC3Q9Y3C0 194 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 A0A0B4J203 849 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 G3V318 75 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 H7C2Y5 167 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 MFNGO00587 321 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 RRHO14718 337 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 ATP6V0E1O15342 81 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 FABP7O15540 132 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 RBBP9O75884 186 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 FCGR3AP08637 254 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 GSTP1P09211 210 aaKnown RBP12.56□□□□□ -0.4
USE1-201ENST00000263897 GNB3P16520 340 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 SERPINB10P48595 397 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 EGFEM1PQ0D2K5 195 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 DRAXINQ8NBI3 349 aaPredicted RBP12.56□□□□□ -0.4
USE1-201ENST00000263897 OR8U1Q8NH10 309 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 PARP11Q9NR21 331 aa12.56□□□□□ -0.4
USE1-201ENST00000263897 TRAV41A0A0B4J266 112 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 FCN1O00602 326 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 GSTT2P0CG29 244 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 GSTT2BP0CG30 244 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
USE1-201ENST00000263897 HOXD3P31249 432 aaPredicted RBP12.55□□□□□ -0.4
USE1-201ENST00000263897 CX3CL1P78423 397 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 KIAA0141Q14154 515 aaPredicted RBP12.55□□□□□ -0.4
USE1-201ENST00000263897 IGSF11Q5DX21 431 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 ZNF660Q6AZW8 331 aaPredicted RBP12.55□□□□□ -0.4
USE1-201ENST00000263897 TMEM65Q6PI78 240 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 TPRA1Q86W33 373 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 MYOZ3Q8TDC0 251 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 KLK15Q9H2R5 256 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 STUB1Q9UNE7 303 aa12.55□□□□□ -0.4
USE1-201ENST00000263897 A0A075B6Q4 140 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 NOTOA8MTQ0 251 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 K7EIL1 84 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 BET1O15155 118 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 DIRAS3O95661 229 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 LINC00205P59089 165 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 SRSF7Q16629 238 aaKnown RBP eCLIP12.54□□□□□ -0.4
USE1-201ENST00000263897 DEFB136Q30KP8 78 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 ZNF383Q8NA42 475 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 MINDY2Q8NBR6 621 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.54□□□□□ -0.4
USE1-201ENST00000263897 OR10J5Q8NHC4 309 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 CABLES2Q9BTV7 478 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 ATG5Q9H1Y0 275 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
USE1-201ENST00000263897 SSR3Q9UNL2 185 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 GAB2Q9UQC2 676 aa12.54□□□□□ -0.4
USE1-201ENST00000263897 TRBV6-7A0A0A0MS04 114 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 SMIM30A4D0T7 59 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 TFAP2AP05549 437 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 TALDO1P37837 337 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 CRIP2P52943 208 aaPredicted RBP12.53□□□□□ -0.4
USE1-201ENST00000263897 RPS16P62249 146 aaKnown RBP12.53□□□□□ -0.4
USE1-201ENST00000263897 ARFRP1Q13795 201 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 ARL6IP1Q15041 203 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 PLGLAQ15195 96 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 PSG5Q15238 335 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 CDNFQ49AH0 187 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 ZNF773Q6PK81 442 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 ZNF491Q8N8L2 437 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 MAFIPQ8WZ33 124 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 DPF1Q92782 380 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 NUBP2Q9Y5Y2 271 aa12.53□□□□□ -0.4
USE1-201ENST00000263897 WI2-2373I1.2A0A1W2PRP0 233 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 M0R1X1 148 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 EGR2P11161 476 aaPredicted RBP12.52□□□□□ -0.41
USE1-201ENST00000263897 RAB9AP51151 201 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 RAB25P57735 213 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 NDPQ00604 133 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 C19orf54Q5BKX5 351 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 Q6ZS49 121 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 TSNAXQ99598 290 aaKnown RBP12.52□□□□□ -0.41
USE1-201ENST00000263897 CENPOQ9BU64 300 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 OR51E2Q9H255 320 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.52□□□□□ -0.41
USE1-201ENST00000263897 METTL1Q9UBP6 276 aaKnown RBP12.52□□□□□ -0.41
USE1-201ENST00000263897 ELF5Q9UKW6 265 aaPredicted RBP12.52□□□□□ -0.41
USE1-201ENST00000263897 VSIG4Q9Y279 399 aa12.52□□□□□ -0.41
USE1-201ENST00000263897 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 I3L521 148 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 APOA2P02652 100 aa12.51□□□□□ -0.41
USE1-201ENST00000263897 RUNX1Q01196 453 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms