RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 REG1BP48304 166 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 RPL30P62888 115 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 SUPT4H1P63272 117 aaKnown RBP7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 CBX3Q13185 183 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 SLC9A3R2Q15599 337 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 TMEM30BQ3MIR4 351 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 C4orf46Q504U0 113 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 LY6G6FQ5SQ64 297 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 GLDNQ6ZMI3 551 aaPredicted RBP7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 TBC1D26Q86UD7 250 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 OR10X1Q8NGY0 326 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 OR51H1Q8NH63 302 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 SCGB3A2Q96PL1 93 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 C7orf69Q9H7B7 122 aa7.92□□□□□ -1.14
SNRNP40-201ENST00000263694 CELSR1Q9NYQ6 3014 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 TEX13DA0A0J9YY54 714 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 LINC00473A8K010 186 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 M0R1X1 148 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 ITGB1BP1O14713 200 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 MPPED1O15442 326 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 DHFRP00374 187 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 IGLV1-47P01700 117 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 ARG1P05089 322 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 VAMP1P23763 118 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 CD34P28906 385 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 ECI1P42126 302 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 MECP2P51608 486 aaKnown RBP7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 OR2B11Q5JQS5 317 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 LIN54Q6MZP7 749 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 LPCAT3Q6P1A2 487 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 LHFPL4Q7Z7J7 247 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 BVESQ8NE79 360 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 OR4P4Q8NGL7 312 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 OR13D1Q8NGV5 346 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 CASTOR1Q8WTX7 329 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 C17orf50Q8WW18 174 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 RTN4IP1Q8WWV3 396 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 ZNF251Q9BRH9 671 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 HEXA-AS1Q9H8Q6 139 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 SOX21Q9Y651 276 aaPredicted RBP7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 AUP1Q9Y679 476 aa7.91□□□□□ -1.14
SNRNP40-201ENST00000263694 TRAV20A0A0B4J274 112 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 CENPVL3A0A0U1RRI6 287 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 C9orf170A2RU37 121 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 CRYM-AS1A6NIL9 109 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 A8MV72 311 aaPredicted RBP7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 BUB1B-PAK6H3BSN5 160 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 RAB29O14966 203 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 RAB7AP51149 207 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 PRRX1P54821 245 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 DHODHQ02127 395 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 DHRS2Q13268 280 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 EIF4EBP1Q13541 118 aaPredicted RBP7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 HLA-DRB5Q30154 266 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 TMEM128Q5BJH2 165 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 CMTM1Q8IZ96 169 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 LINC00311Q8N616 119 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 UXS1Q8NBZ7 420 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 OR11H6Q8NGC7 330 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 ZNF596Q8TC21 504 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 DMRTB1Q96MA1 342 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 TP53RKQ96S44 253 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 ALX4Q9H161 411 aaPredicted RBP7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 GHITMQ9H3K2 345 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 NAA60Q9H7X0 242 aa7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 UNKLQ9H9P5 680 aaKnown RBP7.9□□□□□ -1.14
SNRNP40-201ENST00000263694 ODF3BA8MYP8 253 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 HLA-AP01891 365 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 IL5P05113 134 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 OR5AC1P0C628 307 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 CT45A6P0DMU7 189 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 CT45A5P0DMU8 189 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 CT45A7P0DMV0 189 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 IGHV4-38-2P0DP08 117 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 GZMKP49863 264 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 RAG2P55895 527 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 BRWD1-AS2P59051 145 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 TAS2R31P59538 309 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 RND3P61587 244 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 C2orf68Q2NKX9 166 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 ANKRD55Q3KP44 614 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 RUSC1-AS1Q66K80 236 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 NCR3LG1Q68D85 454 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 CYB5R2Q6BCY4 276 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 LYG2Q86SG7 212 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 SGPP2Q8IWX5 399 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 CADM3Q8N126 398 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 DYNAPQ8N1N2 210 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 C8orf31Q8N9H6 132 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 TCTEX1D2Q8WW35 142 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 ST6GALNAC6Q969X2 333 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 ZNF486Q96H40 463 aaPredicted RBP7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 AKR1E2Q96JD6 320 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 MRPL20Q9BYC9 149 aaKnown RBP7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 OTOGQ6ZRI0 2925 aa7.89□□□□□ -1.15
SNRNP40-201ENST00000263694 TRAV40A0A0B4J280 105 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 C3orf85A0A1B0GTC6 90 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 LY6LH3BQJ8 138 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 RAMP3O60896 148 aa7.88□□□□□ -1.15
SNRNP40-201ENST00000263694 SFT2D2O95562 160 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms