RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 K7N7A8 449 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 MGST3O14880 152 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 SIX6O95475 246 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 IGHV2-70P01814 119 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 MUC1P15941 1255 aaPredicted RBP10.85□□□□□ -0.67
SGCA-201ENST00000262018 GABRA2P47869 451 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 PROK1P58294 105 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 AESQ08117 197 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 KRBOX4Q5JUW0 171 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 LY6G6FQ5SQ64 297 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 FAM201AQ5SY85 155 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 C6orf183Q5T699 404 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 RUSC1-AS1Q66K80 236 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 TEX261Q6UWH6 196 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 SGPP2Q8IWX5 399 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 ZNF561Q8N587 486 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 OR10J5Q8NHC4 309 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 KIRREL1Q96J84 757 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 NCOR1P1Q9H4R4 102 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 TAF9BQ9HBM6 251 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 KCNIP1Q9NZI2 227 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 POLR3KQ9Y2Y1 108 aaPredicted RBP10.85□□□□□ -0.67
SGCA-201ENST00000262018 OR2W1Q9Y3N9 320 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 MAB21L2Q9Y586 359 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 U3KQ87 197 aa10.85□□□□□ -0.67
SGCA-201ENST00000262018 TRAV40A0A0B4J280 105 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 A0A1B0GW55 424 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 L7N2F9 121 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 DUX4L2P0CJ85 424 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 DUX4L3P0CJ86 424 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 DUX4L4P0CJ87 422 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 DUX4L5P0CJ88 424 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 DUX4L6P0CJ89 424 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 DUX4L7P0CJ90 424 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 PET100P0DJ07 73 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 GLIPR1P48060 266 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 PIGPP57054 158 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 RND3P61587 244 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 PAX8Q06710 450 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 ABCA11PQ4W5N1 156 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 TMEM155Q4W5P6 130 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 TRAT1Q6PIZ9 186 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 FAM185AQ8N0U4 392 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 CCDC71LQ8N9Z2 235 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 TOLLIPQ9H0E2 274 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 RAB18Q9NP72 206 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 DUX4Q9UBX2 424 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 BIRC6Q9NR09 4857 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 IGKV1D-13A0A0B4J2D9 117 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 TEX13DA0A0J9YY54 714 aaPredicted RBP10.84□□□□□ -0.67
SGCA-201ENST00000262018 C12orf77C9JDV5 145 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 LGALS8O00214 317 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 IGKV1-13P0DP09 117 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 SLC25A4P12235 298 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 GNRHRP30968 328 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 AP2S1P53680 142 aaPredicted RBP10.84□□□□□ -0.67
SGCA-201ENST00000262018 RAB14P61106 215 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 ANKRD55Q3KP44 614 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 BRD3OSQ6XYD6 125 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 ZNF788Q6ZQV5 615 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 KCTD9Q7L273 389 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 OR11H4Q8NGC9 324 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 OR5D13Q8NGL4 314 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 RTN4IP1Q8WWV3 396 aaPredicted RBP10.84□□□□□ -0.67
SGCA-201ENST00000262018 WDR89Q96FK6 387 aaPredicted RBP10.84□□□□□ -0.67
SGCA-201ENST00000262018 GALNT14Q96FL9 552 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 GAFA1Q96PS6 74 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 NMES1Q9C002 83 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 FAM234AQ9H0X4 552 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 PRDM13Q9H4Q3 707 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 SLC2A9Q9NRM0 540 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 PLSCR3Q9NRY6 295 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 OR1A1Q9P1Q5 309 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 UBQLN2Q9UHD9 624 aa10.84□□□□□ -0.67
SGCA-201ENST00000262018 PLXNB1O43157 2135 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 TRAV38-1A0A0B4J264 116 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 GPR31O00270 319 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 OR2F2O95006 317 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 OPN1MWP04001 364 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 OPN1MW2P0DN77 364 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 OPN1MW3P0DN78 364 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 S100A11P31949 105 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 P2RX3P56373 397 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 OR2F1Q13607 317 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 LGALSLQ3ZCW2 172 aaPredicted RBP10.83□□□□□ -0.68
SGCA-201ENST00000262018 PHLDA2Q53GA4 152 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 Q5BKY6 102 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 LDLRAD3Q86YD5 345 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 ZNF565Q8N9K5 539 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 ZNRF1Q8ND25 227 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 OR13A1Q8NGR1 328 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 OR1L1Q8NH94 360 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 SECTM1Q8WVN6 248 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 IL1F10Q8WWZ1 152 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 SLC5A7Q9GZV3 580 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 DNTTIP1Q9H147 329 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 PATZ1Q9HBE1 687 aaKnown RBP10.83□□□□□ -0.68
SGCA-201ENST00000262018 ZFP57Q9NU63 452 aa10.83□□□□□ -0.68
SGCA-201ENST00000262018 AURKAIP1Q9NWT8 199 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms