RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MKXQ8IYA7 352 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF611Q8N823 705 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 OR56B2PQ8NGI1 322 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 OR5A2Q8NGI9 324 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 GMPPAQ96IJ6 420 aaPredicted RBP9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 POM121L2Q96KW2 1035 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 C20orf144Q9BQM9 153 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 PLK3Q9H4B4 646 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 CCL28Q9NRJ3 127 aa9.15□□□□□ -0.95
CHRNA1-201ENST00000261007 A0A096LPE4 126 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 IGKV1D-13A0A0B4J2D9 117 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 A0A1W2PPQ1 181 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 A0A1W2PPZ6 126 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 FTH1P19P0C7X4 201 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 IGKV1-13P0DP09 117 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 TNFSF10P50591 281 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 ELLP55199 621 aaPredicted RBP9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 RANP62826 216 aaKnown RBP9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 OR1K1Q8NGR3 316 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 MRPL30Q8TCC3 161 aaKnown RBP9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 PARLQ9H300 379 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF552Q9H707 407 aaPredicted RBP9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 PSENENQ9NZ42 101 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 MPC1Q9Y5U8 109 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 ARID1AO14497 2285 aa9.14□□□□□ -0.95
CHRNA1-201ENST00000261007 OR5B21A6NL26 309 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 OR7C1O76099 320 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 NXPH3O95157 252 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 IGHG3P01860 377 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 GYPAP02724 150 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 UBE2NP61088 152 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 RPL15P61313 204 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 FGF12P61328 243 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 GNB2P62879 340 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 TGFBR3Q03167 851 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 MRPL49Q13405 166 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 DAZAP2Q15038 168 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 NUFIP2Q7Z417 695 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 OR10J5Q8NHC4 309 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 RIMS4Q9H426 269 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 ATP23Q9Y6H3 246 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 TNRC6AQ8NDV7 1962 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 A0A0G2JRQ6 117 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 CTXND1A0A1B0GTU2 59 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 ANKRD30BLA7E2S9 258 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 H3BP45 60 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 HPRT1P00492 218 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 SERPINE2P07093 398 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 SCTP09683 121 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 CCNOP22674 350 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 ARL16Q0P5N6 197 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 RSPO4Q2I0M5 234 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 C9orf135Q5VTT2 229 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 CYB5R2Q6BCY4 276 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 IGFL2Q6UWQ7 119 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 ZCCHC14Q8WYQ9 949 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 TAF15Q92804 592 aaKnown RBP eCLIP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 BCL2L2Q92843 193 aaPredicted RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 RPUSD4Q96CM3 377 aaKnown RBP9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 MS4A10Q96PG2 267 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 MIEN1Q9BRT3 115 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 ELOVL1Q9BW60 279 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 DEFB127Q9H1M4 99 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 MYO7BQ6PIF6 2116 aa9.13□□□□□ -0.95
CHRNA1-201ENST00000261007 TRAV17A0A0B4J275 112 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 SLC33A1O00400 549 aaPredicted RBP9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 TNFSF13O75888 250 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 PAFAH1B2P68402 229 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 PDCD1Q15116 288 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 HAPLN4Q86UW8 402 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 RPP25LQ8N5L8 163 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 DEFB124Q8NES8 71 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 OR4C12Q96R67 309 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 ASCL3Q9NQ33 180 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 SPRR3Q9UBC9 169 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 PXMP4Q9Y6I8 212 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 USP34Q70CQ2 3546 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 TRBV6-6A0A0A6YYG2 114 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 CD300LBA8K4G0 201 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 FAM90A26D6RGX4 464 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 TRAPPC2LH3BP13 241 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 RPL29P47914 159 aaKnown RBP9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 FOXL1Q12952 345 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 ATP6V1FQ16864 119 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 TBC1D28Q2M2D7 210 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF705AQ6ZN79 300 aaPredicted RBP9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 TMEM144Q7Z5S9 345 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 ARL6IP6Q8N6S5 226 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 NEIL1Q96FI4 390 aaPredicted RBP9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 TRAPPC1Q9Y5R8 145 aa9.12□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF705FA8MVS1 300 aaPredicted RBP9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 MLNRO43193 412 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF705DP0CH99 300 aaPredicted RBP9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF705BP0CI00 300 aaPredicted RBP9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 GNG3P63215 75 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 MRPS11P82912 194 aaKnown RBP9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 C3AR1Q16581 482 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 ANKRD39Q53RE8 183 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 ATP1A1-AS1Q5TC04 95 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 TEX43Q6ZNM6 134 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms