RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 FAM96BQ9Y3D0 163 aa14.69□□□□□ -0.06
SSB-201ENST00000260956 DSCAML1Q8TD84 2053 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 POLQO75417 2590 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 LOC105371267A0A1B0GV96 52 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 C9JQL5 133 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 TXNL1O43396 289 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 SSTR5P35346 364 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 GUCA2BQ16661 112 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 KRBOX4Q5JUW0 171 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 SPAG16Q8N0X2 631 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 OR2V2Q96R30 315 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 DCTN5Q9BTE1 182 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 COA4Q9NYJ1 87 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 CACNG5Q9UF02 275 aa14.68□□□□□ -0.06
SSB-201ENST00000260956 GABRA2P47869 451 aa14.67□□□□□ -0.06
SSB-201ENST00000260956 HTD2P86397 168 aa14.67□□□□□ -0.06
SSB-201ENST00000260956 PUSL1Q8N0Z8 303 aaKnown RBP14.67□□□□□ -0.06
SSB-201ENST00000260956 TPRX1Q8N7U7 411 aa14.67□□□□□ -0.06
SSB-201ENST00000260956 LINC01560Q8TB33 94 aa14.67□□□□□ -0.06
SSB-201ENST00000260956 MUCL1Q96DR8 90 aa14.67□□□□□ -0.06
SSB-201ENST00000260956 AGMATQ9BSE5 352 aa14.67□□□□□ -0.06
SSB-201ENST00000260956 MRPL37Q9BZE1 423 aaKnown RBP14.67□□□□□ -0.06
SSB-201ENST00000260956 TMEM231Q9H6L2 316 aa14.67□□□□□ -0.06
SSB-201ENST00000260956 RNF212BA8MTL3 300 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 CD40P25942 277 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 IL2RGP31785 369 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 PPP1CCP36873 323 aaKnown RBP14.66□□□□□ -0.06
SSB-201ENST00000260956 RAB5CP51148 216 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 DYNLT3P51808 116 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 TRAT1Q6PIZ9 186 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 HSD17B11Q8NBQ5 300 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 RAB40CQ96S21 281 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 SEC11CQ9BY50 192 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 OR2D2Q9H210 308 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 DUSP13Q9UII6 198 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 STRAPQ9Y3F4 350 aaKnown RBP14.66□□□□□ -0.06
SSB-201ENST00000260956 SPEF1Q9Y4P9 236 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 RFNGQ9Y644 331 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 DSCAMO60469 2012 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 FAM74A7A6NL05 159 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 NXPH3O95157 252 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 CGB3P0DN86 165 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 CGB7P0DN87 165 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 ATP6V0CP27449 155 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 FHITP49789 147 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 ARHGDIBP52566 201 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 VAMP2P63027 116 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 ZNF266Q14584 549 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 CLINT1Q14677 625 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 FAM74A3Q4VXF1 159 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 MIDNQ504T8 468 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 HAPLN4Q86UW8 402 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 NUP37Q8NFH4 326 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 OR5C1Q8NGR4 320 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 C17orf50Q8WW18 174 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 ITLN1Q8WWA0 313 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 NARS2Q96I59 477 aaKnown RBP14.66□□□□□ -0.06
SSB-201ENST00000260956 SNX22Q96L94 193 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 SPOCK3Q9BQ16 436 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 MMP24Q9Y5R2 645 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 WSB1Q9Y6I7 421 aa14.66□□□□□ -0.06
SSB-201ENST00000260956 TEX15Q9BXT5 2789 aa14.65□□□□□ -0.06
SSB-201ENST00000260956 ODAMA1E959 279 aa14.65□□□□□ -0.06
SSB-201ENST00000260956 RAMP3O60896 148 aa14.65□□□□□ -0.06
SSB-201ENST00000260956 CST7O76096 145 aa14.65□□□□□ -0.06
SSB-201ENST00000260956 RPS23P62266 143 aaKnown RBP14.65□□□□□ -0.06
SSB-201ENST00000260956 MOGAT3Q86VF5 341 aa14.65□□□□□ -0.06
SSB-201ENST00000260956 COMMD1Q8N668 190 aa14.65□□□□□ -0.06
SSB-201ENST00000260956 NKX6-2Q9C056 277 aaPredicted RBP14.65□□□□□ -0.06
SSB-201ENST00000260956 NCOR1P1Q9H4R4 102 aa14.65□□□□□ -0.06
SSB-201ENST00000260956 ESRP2Q9H6T0 727 aaKnown RBP14.65□□□□□ -0.06
SSB-201ENST00000260956 ABCA4P78363 2273 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 RNASEK-C17orf49H0YIS7 233 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 TRIM77I1YAP6 450 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 MGST3O14880 152 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 SNCAP37840 140 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 SWI5Q1ZZU3 235 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.64□□□□□ -0.07
SSB-201ENST00000260956 FAM216AQ8WUB2 273 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 HIPK2Q9H2X6 1198 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 C19orf12Q9NSK7 152 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 RNF150Q9ULK6 438 aa14.64□□□□□ -0.07
SSB-201ENST00000260956 RAI1Q7Z5J4 1906 aaPredicted RBP14.64□□□□□ -0.07
SSB-201ENST00000260956 IGHV3OR15-7A0A075B7D8 119 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 FAM90A26D6RGX4 464 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 F2RL2O00254 374 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 SYNGR2O43760 224 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 PROP1O75360 226 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 IGHV1-46P01743 117 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 THBDP07204 575 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 OMGP23515 440 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 TAS2R30P59541 319 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 DEFA5Q01523 94 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 TCTEX1D1Q8N7M0 179 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 Q8TCH9 128 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 WFIKKN1Q96NZ8 548 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 ATP5SQ99766 215 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 ELOVL5Q9NYP7 299 aa14.63□□□□□ -0.07
SSB-201ENST00000260956 RBM7Q9Y580 266 aaKnown RBP14.63□□□□□ -0.07
SSB-201ENST00000260956 CACNA1DQ01668 2161 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms