RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 AMMECR1Q9Y4X0 333 aaPredicted RBP12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 HSD17B6O14756 317 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 RGS13O14921 159 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 PAX6P26367 422 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 SLC6A1P30531 599 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 UCP3P55916 312 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 DEFA1P59665 94 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 DEFA3P59666 94 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 MINOS1Q5TGZ0 78 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 DRAM1Q8N682 238 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 TMEM160Q9NX00 188 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 TBL2Q9Y4P3 447 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 MINOS1-NBL1R4GNA1 71 aa12.8□□□□□ -0.36
CCDC90B-201ENST00000260054 HIVEP2P31629 2446 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 ANK3Q12955 4377 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 LEUTXA8MZ59 168 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 PGAM2P15259 253 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 PI3P19957 117 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 EPHA1P21709 976 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 IL3RAP26951 378 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 REG1BP48304 166 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 TPTE2P1Q5T6R2 138 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 MZT2BQ6NZ67 158 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 ZNF833PQ6ZTB9 187 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 DYNAPQ8N1N2 210 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 RSRP1Q9BUV0 290 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 GHITMQ9H3K2 345 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 GAB2Q9UQC2 676 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 HILPDAQ9Y5L2 63 aa12.79□□□□□ -0.36
CCDC90B-201ENST00000260054 A0A0U1RQK1 487 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 NDUFB6O95139 128 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 RBMS2Q15434 407 aaKnown RBP12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 PLA1AQ53H76 456 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 NRARPQ7Z6K4 114 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 SLC38A6Q8IZM9 456 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 RPEQ96AT9 228 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 GPHA2Q96T91 129 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 SLC25A21Q9BQT8 299 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 GPR132Q9UNW8 380 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 VSIG4Q9Y279 399 aa12.78□□□□□ -0.36
CCDC90B-201ENST00000260054 TNFSF12O43508 249 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 SLC22A5O76082 557 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 CEACAM3P40198 252 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 ECI1P42126 302 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 LINC00205P59089 165 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 BPIFB3P59826 476 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 SSX2Q16385 188 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 BCL6BQ8N143 479 aaPredicted RBP12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 TEX29Q8N6K0 151 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 BVESQ8NE79 360 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 RTN4IP1Q8WWV3 396 aaPredicted RBP12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 C22orf15Q8WYQ4 148 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 MALSU1Q96EH3 234 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 ZNF486Q96H40 463 aaPredicted RBP12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 S1PR3Q99500 378 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 DPAGT1Q9H3H5 408 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 C5orf66Q9H5L9 145 aa12.77□□□□□ -0.36
CCDC90B-201ENST00000260054 NAV3Q8IVL0 2385 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 FAM240BA0A1B0GVZ2 78 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 M0R1X1 148 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 GPR31O00270 319 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 ZNF816Q0VGE8 651 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 EIF4EBP1Q13541 118 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 MSMO1Q15800 293 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 PHLDA2Q53GA4 152 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 C9orf139Q6ZV77 190 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 AKR1E2Q96JD6 320 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 RTBDNQ9BSG5 229 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 MRPL20Q9BYC9 149 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 MS4A7Q9GZW8 240 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 FLVCR2Q9UPI3 526 aa12.77□□□□□ -0.37
CCDC90B-201ENST00000260054 MXRA5Q9NR99 2828 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 A0A1W2PPI3 338 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 TCRBP04435 133 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 CTSDP07339 412 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 HNF1AP20823 631 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 SRP14P37108 136 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 FAM71F2Q6NXP2 309 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 TGIF2LXQ8IUE1 241 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 ZDHHC22Q8N966 263 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 ENKURQ8TC29 256 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 ZFAND1Q8TCF1 268 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 SLC2A9Q9NRM0 540 aa12.76□□□□□ -0.37
CCDC90B-201ENST00000260054 IGHV1-3A0A0C4DH29 117 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 LINC00473A8K010 186 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 INAFM1C9JVW0 142 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 PGLYRP1O75594 196 aaPredicted RBP12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 GAPDHP04406 335 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 CT45A6P0DMU7 189 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 CT45A5P0DMU8 189 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 CT45A7P0DMV0 189 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 DUTP33316 252 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 ZBTB34Q8NCN2 500 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 ADAD2Q8NCV1 583 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 DUSP18Q8NEJ0 188 aa12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 RBMXL1Q96E39 390 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-201ENST00000260054 NABP2Q9BQ15 211 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms