RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 HIST1H1BP16401 226 aaKnown RBP11.65□□□□□ -0.54
ALPK3-201ENST00000258888 NUP37Q8NFH4 326 aa11.65□□□□□ -0.54
ALPK3-201ENST00000258888 RAB29O14966 203 aa11.65□□□□□ -0.54
ALPK3-201ENST00000258888 HBZP02008 142 aa11.65□□□□□ -0.54
ALPK3-201ENST00000258888 NGFRP08138 427 aa11.65□□□□□ -0.54
ALPK3-201ENST00000258888 GABRA6Q16445 453 aa11.65□□□□□ -0.54
ALPK3-201ENST00000258888 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
ALPK3-201ENST00000258888 AP5S1Q9NUS5 200 aa11.65□□□□□ -0.54
ALPK3-201ENST00000258888 HSPB8Q9UJY1 196 aa11.65□□□□□ -0.54
ALPK3-201ENST00000258888 PAXXQ9BUH6 204 aa11.65□□□□□ -0.55
ALPK3-201ENST00000258888 HIGD1AQ9Y241 93 aa11.65□□□□□ -0.55
ALPK3-201ENST00000258888 MFAP2P55001 183 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 CEACAM21Q3KPI0 293 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 TAF1LQ8IZX4 1826 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 PILRAQ9UKJ1 303 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 COL4A5P29400 1685 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 A6NDN8 102 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 K7N7A8 449 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 CD1BP29016 333 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 PRDX2P32119 198 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF660Q6AZW8 331 aaPredicted RBP11.64□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF501Q96CX3 271 aaPredicted RBP11.64□□□□□ -0.55
ALPK3-201ENST00000258888 RABAC1Q9UI14 185 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 HIST1H1EP10412 219 aaKnown RBP11.64□□□□□ -0.55
ALPK3-201ENST00000258888 CD99P14209 185 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 STXBP6Q8NFX7 210 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 ABHD14BQ96IU4 210 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 C1RLQ9NZP8 487 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 H0Y980 276 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 CCL8P80075 99 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 PCDH15Q96QU1 1955 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 GAPDHP04406 335 aaKnown RBP11.64□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF343Q6P1L6 599 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 SCTP09683 121 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 PRR7Q8TB68 274 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 Q8WTZ3 238 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 GPHA2Q96T91 129 aa11.64□□□□□ -0.55
ALPK3-201ENST00000258888 IL36RNQ9UBH0 155 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 C16orf97H3BN30 126 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 NDUFS8O00217 210 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 MUC15Q8N387 334 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 THSD7AQ9UPZ6 1657 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 MFSD2BA6NFX1 497 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 ERGP11308 486 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 NAAAQ02083 359 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 P2RX4Q99571 388 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 CCL13Q99616 98 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 GCSHP23434 173 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 CEBPDP49716 269 aaPredicted RBP11.63□□□□□ -0.55
ALPK3-201ENST00000258888 ZP4Q12836 540 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 WDFY1Q8IWB7 410 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 LPAR2Q9HBW0 351 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 LOC389332A0A1B0GUA5 103 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 OR10J1P30954 320 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 PXMP4Q9Y6I8 212 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 NFAM1Q8NET5 270 aaPredicted RBP11.63□□□□□ -0.55
ALPK3-201ENST00000258888 ADAMTS17Q8TE56 1095 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 OR4C46A6NHA9 309 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF98A6NK75 572 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 PLAUP00749 431 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 HERVK_113P61574 105 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 MEF2BQ02080 365 aaPredicted RBP11.63□□□□□ -0.55
ALPK3-201ENST00000258888 ASCL5Q7RTU5 278 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 WNT2BQ93097 391 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 LHFPL6Q9Y693 200 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 SRSF9Q13242 221 aaKnown RBP eCLIP11.63□□□□□ -0.55
ALPK3-201ENST00000258888 TBX15Q96SF7 602 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 HEXA-AS1Q9H8Q6 139 aa11.63□□□□□ -0.55
ALPK3-201ENST00000258888 AQP3Q92482 292 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 TP53RKQ96S44 253 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 MALRD1Q5VYJ5 2156 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 HYPMO75409 117 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 SUCLG1P53597 346 aaKnown RBP11.62□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF552Q9H707 407 aaPredicted RBP11.62□□□□□ -0.55
ALPK3-201ENST00000258888 KCNE5Q9UJ90 142 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF841Q6ZN19 808 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 RBKSQ9H477 322 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 TSPAN2O60636 221 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 NDUFB4O95168 129 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 P2RY4P51582 365 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 SSX8Q7RTT4 187 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 ANK1P16157 1881 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 IGLV1-36A0A0B4J1U3 117 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 HPRT1P00492 218 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 OR2V2Q96R30 315 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 DOCK4Q8N1I0 1966 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 CFDP00746 253 aaPredicted RBP11.62□□□□□ -0.55
ALPK3-201ENST00000258888 SERF2P84101 59 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 ZNF826PQ6ZT77 177 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 ROM1Q03395 351 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 FAM3BP58499 235 aaPredicted RBP11.62□□□□□ -0.55
ALPK3-201ENST00000258888 KCNK17Q96T54 332 aa11.62□□□□□ -0.55
ALPK3-201ENST00000258888 OPN3Q9H1Y3 402 aaPredicted RBP11.62□□□□□ -0.55
ALPK3-201ENST00000258888 RAB24Q969Q5 203 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 OR4C12Q96R67 309 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 TRBV5-7A0A0A0MS05 114 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 TTC32Q5I0X7 151 aa11.61□□□□□ -0.55
ALPK3-201ENST00000258888 PUSL1Q8N0Z8 303 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms