RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CA7P43166 264 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 EDDM3AQ14507 147 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 SLC25A30Q5SVS4 291 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 ADOQ96SZ5 270 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 CHST8Q9H2A9 424 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 C11orf68Q9H3H3 251 aaKnown RBP5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 KCNK15Q9H427 330 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 HIGD1AQ9Y241 93 aa5.86□□□□□ -1.47
PDGFRA-201ENST00000257290 HSPB6O14558 160 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 VN1R2Q8NFZ6 395 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 OR10G7Q8NGN6 311 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 PHF7Q9BWX1 381 aaPredicted RBP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 HEYLQ9NQ87 328 aaPredicted RBP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 WDR90Q96KV7 1748 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 SIPA1L1O43166 1804 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 BLVRBP30043 206 aaPredicted RBP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 DYNLT3P51808 116 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 DLX6P56179 175 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 OTPQ5XKR4 325 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 Q6ZVH6 145 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 SCAMP4Q969E2 229 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 BORCS8Q96FH0 119 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 KCNK17Q96T54 332 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 CTXND1A0A1B0GTU2 59 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 TMPRSS2O15393 492 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 IGLC1P0CG04 106 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 RND2P52198 227 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 PPP2CBP62714 309 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 SRSF1Q07955 248 aaKnown RBP eCLIP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 CD226Q15762 336 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 C1orf195Q5TG92 126 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 DNM1P46Q6ZS02 220 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 NUP37Q8NFH4 326 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF689Q96CS4 500 aaPredicted RBP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 C19orf24Q9BVV8 132 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 SLC25A22Q9H936 323 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 DMRT3Q9NQL9 472 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 A0A1W2PP55 124 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 NPIPB15A6NHN6 443 aaPredicted RBP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 PAGE4O60829 102 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 CSN3P07498 182 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 PRTN3P24158 256 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 CRYBB3P26998 211 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 C1orf53Q5VUE5 145 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 TMEM256Q8N2U0 113 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 AQP3Q92482 292 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 LSM10Q969L4 123 aaKnown RBP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF319Q9P2F9 582 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 CDK5RAP2Q96SN8 1893 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 LINC01553A4QN01 128 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 HSPE1P61604 102 aaKnown RBP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 SPANXN5Q5MJ07 72 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 OR1L8Q8NGR8 309 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 SFXN3Q9BWM7 321 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF665Q9H7R5 613 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 MCTS1Q9ULC4 181 aaKnown RBP5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 OR1A2Q9Y585 309 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 ENTPD2Q9Y5L3 495 aa5.85□□□□□ -1.47
PDGFRA-201ENST00000257290 A0A1W2PPM0 123 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 DPM2O94777 84 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 IGLV3-27P01718 113 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 C1QTNF9P0C862 333 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF121P58317 390 aaPredicted RBP5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 SERF2P84101 59 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 ASCL5Q7RTU5 278 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 ANKRD29Q8N6D5 301 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 NPEPL1Q8NDH3 523 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 PRSS16Q9NQE7 514 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 VSIG4Q9Y279 399 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF133P52736 654 aaPredicted RBP5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 HMGA2P52926 109 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 OR1C1Q15619 314 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 SGCBQ16585 318 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 DMRTC1Q5HYR2 192 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 DLX4Q92988 240 aaPredicted RBP5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 DCBLD2Q96PD2 775 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 PELI2Q9HAT8 420 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 UBE2L5PA0A1B0GUS4 154 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 CTSBP07858 339 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 HMGA1P17096 107 aaKnown RBP5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 ZXDAP98168 799 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 BCORP1Q8N888 145 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 ABHD17AQ96GS6 310 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 DUX3Q96PT4 197 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 C5AR2Q9P296 337 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 A0A087X0K7 114 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 A0A1W2PQU0 124 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 NDUFS4O43181 175 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 RUNX1Q01196 453 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 KLRD1Q13241 179 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 BVES-AS1Q5T3Y7 98 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 KLHDC7BQ96G42 594 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 CMC2Q9NRP2 79 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 SMPXQ9UHP9 88 aa5.84□□□□□ -1.47
PDGFRA-201ENST00000257290 A0A1B0GTI1 187 aa5.84□□□□□ -1.48
PDGFRA-201ENST00000257290 TIMP3P35625 211 aa5.84□□□□□ -1.48
PDGFRA-201ENST00000257290 TNFRSF4P43489 277 aa5.84□□□□□ -1.48
PDGFRA-201ENST00000257290 PSG6Q00889 435 aa5.84□□□□□ -1.48
PDGFRA-201ENST00000257290 TMEM240Q5SV17 173 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms