RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TGFBR1P36897 503 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 UBE2NLQ5JXB2 153 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 STPG2Q8N412 459 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 NPBQ8NG41 125 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 NUDCD2Q8WVJ2 157 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 MAFIPQ8WZ33 124 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 SLC25A46Q96AG3 418 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 GINS4Q9BRT9 223 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 MRPS26Q9BYN8 205 aaKnown RBP10.09□□□□□ -0.79
VPREB3-201ENST00000248948 OR2D2Q9H210 308 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 KIAA1456Q9P272 454 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 GAB2Q9UQC2 676 aa10.09□□□□□ -0.79
VPREB3-201ENST00000248948 GABARAPO95166 117 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 SPDEFO95238 335 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 APOA2P02652 100 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 IGF1P05019 195 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 TFAP2AP05549 437 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 RPS19P39019 145 aaKnown RBP10.08□□□□□ -0.8
VPREB3-201ENST00000248948 F2RL1P55085 397 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 LSM3P62310 102 aaKnown RBP10.08□□□□□ -0.8
VPREB3-201ENST00000248948 TCTEX1D4Q5JR98 221 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 PDPNQ86YL7 162 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 H1FOOQ8IZA3 346 aaPredicted RBP10.08□□□□□ -0.8
VPREB3-201ENST00000248948 RNF5Q99942 180 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 HSPB9Q9BQS6 159 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 DIABLOQ9NR28 239 aa10.08□□□□□ -0.8
VPREB3-201ENST00000248948 ZNF107Q9UII5 783 aaPredicted RBP10.08□□□□□ -0.8
VPREB3-201ENST00000248948 ELF5Q9UKW6 265 aaPredicted RBP10.08□□□□□ -0.8
VPREB3-201ENST00000248948 IGKV1D-8A0A087WSZ0 117 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 TCRBV4S1A1TA0A5B7 111 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 SSX5O60225 188 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 OR5H8P0DN80 308 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 SLC6A1P30531 599 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 NCS1P62166 190 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 C5orf64Q2M2E5 130 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 NSUN5P1Q3KNT7 163 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 HIST2H2BDQ6DRA6 164 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 CNIH2Q6PI25 160 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 FAM110DQ8TAY7 271 aaPredicted RBP10.07□□□□□ -0.8
VPREB3-201ENST00000248948 NOL4LQ96MY1 436 aaPredicted RBP10.07□□□□□ -0.8
VPREB3-201ENST00000248948 ANXA10Q9UJ72 324 aa10.07□□□□□ -0.8
VPREB3-201ENST00000248948 TRAV18A0A075B6X5 111 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 H7C2Y5 167 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 M0R1X1 148 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 XRCC3O43542 346 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 PROP1O75360 226 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 OR8U9P0C7N5 309 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 PF4V1P10720 104 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 VDAC1P21796 283 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 CBX5P45973 191 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 TAGLNQ01995 201 aaKnown RBP10.06□□□□□ -0.8
VPREB3-201ENST00000248948 CFHR3Q02985 330 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 KHDC1LQ5JSQ8 128 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 C10orf99Q6UWK7 81 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 GLDNQ6ZMI3 551 aaPredicted RBP10.06□□□□□ -0.8
VPREB3-201ENST00000248948 ANKRD13BQ86YJ7 626 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 ZNF383Q8NA42 475 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 OR8U1Q8NH10 309 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 R3HDM4Q96D70 268 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 S100A16Q96FQ6 103 aaKnown RBP10.06□□□□□ -0.8
VPREB3-201ENST00000248948 ST6GALNAC5Q9BVH7 336 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 AUNIPQ9H7T9 357 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 SDHAF2Q9NX18 166 aa10.06□□□□□ -0.8
VPREB3-201ENST00000248948 RRHO14718 337 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 CNTFRP26992 372 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 THBS3P49746 956 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 VBP1P61758 197 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 RPL23AP62750 156 aaKnown RBP10.05□□□□□ -0.8
VPREB3-201ENST00000248948 CBX3Q13185 183 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 FOXE3Q13461 319 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 TMEM69Q5SWH9 247 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 TEX38Q6PEX7 206 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 ZNF329Q86UD4 541 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 HOGA1Q86XE5 327 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 ZNF645Q8N7E2 425 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 SAMD12Q8N8I0 201 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 RNF152Q8N8N0 203 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 BEST4Q8NFU0 473 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 ACOT12Q8WYK0 555 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 ADTRPQ96IZ2 230 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 CMTM3Q96MX0 182 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 TSNAXQ99598 290 aaKnown RBP10.05□□□□□ -0.8
VPREB3-201ENST00000248948 SLC35D1Q9NTN3 355 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 ZFP57Q9NU63 452 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 RNF150Q9ULK6 438 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 OR2W1Q9Y3N9 320 aa10.05□□□□□ -0.8
VPREB3-201ENST00000248948 RBM7Q9Y580 266 aaKnown RBP10.05□□□□□ -0.8
VPREB3-201ENST00000248948 IGHV7-81A0A0B4J1V7 117 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 A0A1W2PRX2 142 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 LINC01548A6NM66 108 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 ATP6V0E1O15342 81 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 SLC22A5O76082 557 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 IGHG4P01861 327 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 IGKV1-16P04430 117 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 ELANEP08246 267 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 RRASP10301 218 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 ALDH3B2P48448 385 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 CRIP2P52943 208 aaPredicted RBP10.04□□□□□ -0.8
VPREB3-201ENST00000248948 ARPC4P59998 168 aa10.04□□□□□ -0.8
VPREB3-201ENST00000248948 CTF1Q16619 201 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms