RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 TSPOP30536 169 aa15.6■□□□□ 0.09
PTPN12-201ENST00000248594 UBE2NP61088 152 aaKnown RBP15.6■□□□□ 0.09
PTPN12-201ENST00000248594 PSG4Q00888 419 aa15.6■□□□□ 0.09
PTPN12-201ENST00000248594 TMEM108Q6UXF1 575 aa15.6■□□□□ 0.09
PTPN12-201ENST00000248594 OR56B2PQ8NGI1 322 aa15.6■□□□□ 0.09
PTPN12-201ENST00000248594 OR10G8Q8NGN5 311 aa15.6■□□□□ 0.09
PTPN12-201ENST00000248594 RDH5Q92781 318 aa15.6■□□□□ 0.09
PTPN12-201ENST00000248594 SFRP2Q96HF1 295 aa15.6■□□□□ 0.09
PTPN12-201ENST00000248594 YPEL2Q96QA6 119 aa15.6■□□□□ 0.09
PTPN12-201ENST00000248594 ZP4Q12836 540 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 AMMECR1LQ6DCA0 310 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 GCNT2Q8N0V5 402 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 OR8I2Q8N0Y5 310 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 ZNF439Q8NDP4 499 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 PP6455Q8WZ26 134 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 ADIPOR1Q96A54 375 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 PINX1Q96BK5 328 aaKnown RBP15.59■□□□□ 0.09
PTPN12-201ENST00000248594 CLUHP3Q96NS8 147 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 SERTAD4Q9NUC0 356 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 IGHV3-64DA0A0J9YX35 117 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 A0A1W2PRS3 328 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 OR2T8A6NH00 312 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 TMEM250H0YL14 139 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 PDCD6O75340 191 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 TUSC2O75896 110 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 GNB1P62873 340 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 RCHY1Q96PM5 261 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 MTIF3Q9H2K0 278 aaKnown RBP15.59■□□□□ 0.09
PTPN12-201ENST00000248594 IGHV2OR16-5A0A0B4J2B6 119 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 S100GP29377 79 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 LHX2P50458 406 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 GRB2P62993 217 aaKnown RBP15.59■□□□□ 0.09
PTPN12-201ENST00000248594 LCN2P80188 198 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 LRRC75BQ2VPJ9 315 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 TCTEX1D1Q8N7M0 179 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 IFI44Q8TCB0 444 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 OR5P3Q8WZ94 311 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 RAB40CQ96S21 281 aa15.59■□□□□ 0.09
PTPN12-201ENST00000248594 ARL4DP49703 201 aa15.58■□□□□ 0.09
PTPN12-201ENST00000248594 PTRH2Q9Y3E5 179 aaKnown RBP15.58■□□□□ 0.09
PTPN12-201ENST00000248594 SAP30O75446 220 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 WNT2P09544 360 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 C3orf79P0CE67 100 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 SP5Q6BEB4 398 aaPredicted RBP15.58■□□□□ 0.08
PTPN12-201ENST00000248594 TMEM56Q96MV1 263 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 TMEM56-RWDD3S4R434 201 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 A0A1W2PPV4 95 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 LIPT2A6NK58 231 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 PGLYRP1O75594 196 aaPredicted RBP15.58■□□□□ 0.08
PTPN12-201ENST00000248594 COMPP49747 757 aaPredicted RBP15.58■□□□□ 0.08
PTPN12-201ENST00000248594 GFRA1P56159 465 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 SERF2P84101 59 aa15.58■□□□□ 0.08
PTPN12-201ENST00000248594 ZNF430Q9H8G1 570 aaPredicted RBP15.58■□□□□ 0.08
PTPN12-201ENST00000248594 ZFHX4Q86UP3 3567 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 CTXND1A0A1B0GTU2 59 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 IGHMP01871 453 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 TYMSP04818 313 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 FXYD3Q14802 87 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 KLHDC1Q8N7A1 406 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 MRGPRDQ8TDS7 321 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 PNRC2Q9NPJ4 139 aaKnown RBP15.57■□□□□ 0.08
PTPN12-201ENST00000248594 ARL2-SNX15V9GYD0 113 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 J3QW42 95 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 MPV17L2Q567V2 206 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 ZNF721Q8TF20 911 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 NAA38Q9BRA0 125 aaKnown RBP15.57■□□□□ 0.08
PTPN12-201ENST00000248594 GPR27Q9NS67 375 aa15.57■□□□□ 0.08
PTPN12-201ENST00000248594 PRR19A6NJB7 356 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 CORO2AQ92828 525 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 SRIP30626 198 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 GABRA2P47869 451 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 FUT6P51993 359 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 STUMQ69YW2 141 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 ZNF295-AS1Q8N0V1 137 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 APOBEC3DQ96AK3 386 aaPredicted RBP15.56■□□□□ 0.08
PTPN12-201ENST00000248594 ZNF837Q96EG3 531 aaPredicted RBP15.56■□□□□ 0.08
PTPN12-201ENST00000248594 CSTL1Q9H114 145 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 CLCF1Q9UBD9 225 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 K7EP13 123 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 GPX1P07203 203 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 CD99P14209 185 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 PRAMEF20Q5VT98 475 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 GJC3Q8NFK1 279 aa15.56■□□□□ 0.08
PTPN12-201ENST00000248594 NCOR1O75376 2440 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 TLX3O43711 291 aaPredicted RBP15.55■□□□□ 0.08
PTPN12-201ENST00000248594 EFNA2O43921 213 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 TSPAN2O60636 221 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 SLC25A6P12236 298 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 EN2P19622 333 aaPredicted RBP15.55■□□□□ 0.08
PTPN12-201ENST00000248594 TCTAP57738 103 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 HYAL1Q12794 435 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 HS3ST6Q96QI5 342 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 AGMATQ9BSE5 352 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 GSX1Q9H4S2 264 aaPredicted RBP15.55■□□□□ 0.08
PTPN12-201ENST00000248594 SCO2A0A1W2PP80 73 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 COX5AP20674 150 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 F2RP25116 425 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 NTSR1P30989 418 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 TMEM92Q6UXU6 159 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 OCC1Q8TAD7 63 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms