RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SMPD2O60906 423 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 IGHG3P01860 377 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 MT-ND4LP03901 98 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 CRYBA1P05813 215 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 PGA5P0DJD9 388 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF44P15621 663 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 CA6P23280 308 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 NFYBP25208 207 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 TAS2R30P59541 319 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 RAB2AP61019 212 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 CLINT1Q14677 625 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 MSMO1Q15800 293 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF766Q5HY98 468 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 HES3Q5TGS1 186 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 OR2T2Q6IF00 324 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 INO80CQ6PI98 192 aaPredicted RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 FIP1L1Q6UN15 594 aaKnown RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 TMEM182Q6ZP80 229 aaPredicted RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF788Q6ZQV5 615 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 STX12Q86Y82 276 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 BATF2Q8N1L9 274 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 OR5C1Q8NGR4 320 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 FAM213BQ8TBF2 198 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 RDH5Q92781 318 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 RBMXL1Q96E39 390 aaKnown RBP6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ATP5SQ99766 215 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 CDH20Q9HBT6 801 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 SPRR3Q9UBC9 169 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 LIPGQ9Y5X9 500 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 COX11Q9Y6N1 276 aa6.58□□□□□ -1.36
CXCR4-201ENST00000241393 ARHGAP21Q5T5U3 1957 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 C7orf77A4D0Y5 90 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 GAGE10A6NGK3 116 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 RNF212BA8MTL3 300 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 FAM90A26D6RGX4 464 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 SLC33A1O00400 549 aaPredicted RBP6.57□□□□□ -1.36
CXCR4-201ENST00000241393 HSPB6O14558 160 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 RRHO14718 337 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 HS3ST1O14792 307 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 SH2D1BO14796 132 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 TXNL1O43396 289 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 CHST1O43916 411 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 C1QL1O75973 258 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 TMEM50AO95807 157 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 OR8U8P0C7N1 319 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF806P0C7X5 589 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 MAS1LP35410 378 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 FHITP49789 147 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 SULT1A1P50225 295 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 NOVA1P51513 510 aaKnown RBP6.57□□□□□ -1.36
CXCR4-201ENST00000241393 DYNLT3P51808 116 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 PAX9P55771 341 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 RAB5BP61020 215 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 UBE2NP61088 152 aaKnown RBP6.57□□□□□ -1.36
CXCR4-201ENST00000241393 PPP1CBP62140 327 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 ARG2P78540 354 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 TLE4Q04727 773 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 C3AR1Q16581 482 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 SUMF1Q8NBK3 374 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 GPR146Q96CH1 333 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 RNF125Q96EQ8 232 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 PARD6GQ9BYG4 376 aaPredicted RBP6.57□□□□□ -1.36
CXCR4-201ENST00000241393 TOLLIPQ9H0E2 274 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 TMPRSS5Q9H3S3 457 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 SAV1Q9H4B6 383 aaPredicted RBP6.57□□□□□ -1.36
CXCR4-201ENST00000241393 TMEM9BQ9NQ34 198 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 BEX4Q9NWD9 120 aaPredicted RBP6.57□□□□□ -1.36
CXCR4-201ENST00000241393 COA4Q9NYJ1 87 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 TAAR3PQ9P1P4 343 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 CLCF1Q9UBD9 225 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 ERRFI1Q9UJM3 462 aaPredicted RBP6.57□□□□□ -1.36
CXCR4-201ENST00000241393 RNF150Q9ULK6 438 aa6.57□□□□□ -1.36
CXCR4-201ENST00000241393 DNAJC13O75165 2243 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 KNTC1P50748 2209 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF407Q9C0G0 2248 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 SPEGQ15772 3267 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 RBFOX3A6NFN3 312 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 RHBDL1O75783 438 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 OR2H2O95918 312 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 IFNA5P01569 189 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 SLPIP03973 132 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 HSPB1P04792 205 aaKnown RBP6.56□□□□□ -1.36
CXCR4-201ENST00000241393 PTAFRP25105 342 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 PPP1CCP36873 323 aaKnown RBP6.56□□□□□ -1.36
CXCR4-201ENST00000241393 COL10A1Q03692 680 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 GUSBP1Q15486 140 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 TGIF1Q15583 401 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 SOHLH1Q5JUK2 328 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 AKR1C8PQ5T2L2 129 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 SPSB3Q6PJ21 355 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 Q6ZT83 130 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 P4HA3Q7Z4N8 544 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 ODF3L1Q8IXM7 274 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 C1orf174Q8IYL3 243 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 ZNF561Q8N587 486 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 SCCPDHQ8NBX0 429 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 OR10G4Q8NGN3 311 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 HIST1H2BAQ96A08 127 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 MALSU1Q96EH3 234 aa6.56□□□□□ -1.36
CXCR4-201ENST00000241393 C14orf79Q96F83 325 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms