RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 IGHV4-30-2A0A087WSY4 118 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 IGHV2OR16-5A0A0B4J2B6 119 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 INAFM1C9JVW0 142 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 OR13C7P0DN81 318 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 HLA-GP17693 338 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 HLA-DRB3P79483 266 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 ZNF345Q14585 488 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 SPRNQ5BIV9 151 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 OR2G3Q8NGZ4 309 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 GALMQ96C23 342 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 MSI2Q96DH6 328 aaKnown RBP7.22□□□□□ -1.25
VPS4B-201ENST00000238497 LRP5LA4QPB2 252 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 TSPAN9O75954 239 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 SELENOVP59797 346 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 EIF5AP63241 154 aaKnown RBP7.22□□□□□ -1.25
VPS4B-201ENST00000238497 ASCL4Q6XD76 172 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 DTX2Q86UW9 622 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 OR2C3Q8N628 320 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 OR8G5Q8NG78 346 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 OR2V2Q96R30 315 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 ABHD14AQ9BUJ0 271 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 TMEM222Q9H0R3 208 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 RHOFQ9HBH0 211 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 CYTL1Q9NRR1 136 aa7.22□□□□□ -1.25
VPS4B-201ENST00000238497 STAB1Q9NY15 2570 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 KRBOX1C9JBD0 128 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 OVOL3O00110 214 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 SOX15O60248 233 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 HOXB1P14653 301 aaPredicted RBP7.21□□□□□ -1.25
VPS4B-201ENST00000238497 G6PCP35575 357 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 ERVFRD-1P60508 538 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 PRB3Q04118 309 aaPredicted RBP7.21□□□□□ -1.25
VPS4B-201ENST00000238497 IL24Q13007 206 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 Q3ZCU0 254 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 MIDNQ504T8 468 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 Q6ZR03 302 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 SELENOHQ8IZQ5 122 aaKnown RBP7.21□□□□□ -1.25
VPS4B-201ENST00000238497 AKR1E2Q96JD6 320 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 RAB1BQ9H0U4 201 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 IL36GQ9NZH8 169 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 ANAPC10Q9UM13 185 aa7.21□□□□□ -1.25
VPS4B-201ENST00000238497 A0A0G2JRQ6 117 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 FAM74A7A6NL05 159 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 B9A039 149 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 JTBO76095 146 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 NAPSAO96009 420 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 F2RP25116 425 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 ADIPOQQ15848 244 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 HAGHQ16775 308 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 KRTAP27-1Q3LI81 207 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 FAM74A3Q4VXF1 159 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 THNSL2Q86YJ6 484 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 CBLN2Q8IUK8 224 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 ITLN1Q8WWA0 313 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 OPA3Q9H6K4 179 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 CHODLQ9H9P2 273 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 WFDC1Q9HC57 220 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 SNAPC5O75971 98 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 IGKV3-15P01624 115 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 HBZP02008 142 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 OPN1MWP04001 364 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 SNRNP70P08621 437 aaKnown RBP7.21□□□□□ -1.26
VPS4B-201ENST00000238497 OPN1MW2P0DN77 364 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 OPN1MW3P0DN78 364 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 DAOP14920 347 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 DYNLT3P51808 116 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 EFNA4P52798 201 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 ELLP55199 621 aaPredicted RBP7.21□□□□□ -1.26
VPS4B-201ENST00000238497 EWSR1Q01844 656 aaKnown RBP eCLIP7.21□□□□□ -1.26
VPS4B-201ENST00000238497 VKORC1L1Q8N0U8 176 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 LILRB2Q8N423 598 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 SPIN2AQ99865 258 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 SPIN2BQ9BPZ2 258 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 TLNRD1Q9H1K6 362 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 DCAF16Q9NXF7 216 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 RCC2Q9P258 522 aaKnown RBP7.21□□□□□ -1.26
VPS4B-201ENST00000238497 NUP50Q9UKX7 468 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 TMED3Q9Y3Q3 217 aa7.21□□□□□ -1.26
VPS4B-201ENST00000238497 CYB5R3P00387 301 aaPredicted RBP7.2□□□□□ -1.26
VPS4B-201ENST00000238497 CTXN2P0C2S0 81 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 NDUFB7P17568 137 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 ZP3P21754 424 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 GNG10P50151 68 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 AKR1D1P51857 326 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 SFT2D1Q8WV19 159 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 GPR146Q96CH1 333 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 ATPIF1Q9UII2 106 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 SMCO3A2RU48 225 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 KIAA1324LA8MWY0 1029 aaPredicted RBP7.2□□□□□ -1.26
VPS4B-201ENST00000238497 C12orf77C9JDV5 145 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 LYNX1G3V0Z9 82 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 RAMP3O60896 148 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 CA11O75493 328 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 LYNX1P0DP58 116 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 ETV3LQ6ZN32 361 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 LDLRAD3Q86YD5 345 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 SPAG16Q8N0X2 631 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 OR13A1Q8NGR1 328 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 ASB13Q8WXK3 278 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 CCL17Q92583 94 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms