RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 A8MXK9 166 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 PRAF2O60831 178 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 NUP62P37198 522 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 C17orf58Q2M2W7 97 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 MINOS1Q5TGZ0 78 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 LGI3Q8N145 548 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZDHHC22Q8N966 263 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZNF486Q96H40 463 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 MINOS1-NBL1R4GNA1 71 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 C17orf98A8MV24 154 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 H2BFWTQ7Z2G1 175 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 MRPL41Q8IXM3 137 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 OR4A16Q8NH70 328 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 SPIN2AQ99865 258 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 SPIN2BQ9BPZ2 258 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 NUP50Q9UKX7 468 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 CRYZL1O95825 349 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 CTSDP07339 412 aaPredicted RBP9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 TAGLNQ01995 201 aaKnown RBP9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 CHPT1Q8WUD6 406 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 TSNAXQ99598 290 aaKnown RBP9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 CABLES2Q9BTV7 478 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 IGHV1-69DA0A0B4J2H0 117 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 IGHV1-69P01742 117 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 HLA-DRB5Q30154 266 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 Q6ZS49 121 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 JMJD8Q96S16 334 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 SCGB1D2O95969 90 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 CD74P04233 296 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 DHODHQ02127 395 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 LY6EQ16553 131 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 GLDNQ6ZMI3 551 aaPredicted RBP9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZNF66Q6ZN08 573 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 C8orf46Q8TAG6 207 aa9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 CHD3Q12873 2000 aaKnown RBP9.12□□□□□ -0.95
TNFAIP3-201ENST00000237289 FOXI3A8MTJ6 420 aaPredicted RBP9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 TSPAN4O14817 238 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 DLX1P56177 255 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 BPIFB3P59826 476 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 MMDQ15546 238 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 RPL39P5Q59GN2 51 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 TMEM128Q5BJH2 165 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 RASL11BQ9BPW5 248 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 SOSTQ9BQB4 213 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 SLC2A9Q9NRM0 540 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 TBL2Q9Y4P3 447 aaKnown RBP9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 OR5H14A6NHG9 310 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 NPIPB11E5RHQ5 1161 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 NDUFB6O95139 128 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 HOXB5P09067 269 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 TMEM11P17152 192 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 NAT1P18440 290 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 ATF4P18848 351 aaPredicted RBP9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 SAA4P35542 130 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 GNB1P62873 340 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 TBC1D26Q86UD7 250 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 OR8H3Q8N146 312 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 OR1S1Q8NH92 325 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 MALSU1Q96EH3 234 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 WASHC3Q9Y3C0 194 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 RLN2P04090 185 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 ANXA7P20073 488 aaKnown RBP9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 LPAR6P43657 344 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 F2RL1P55085 397 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 HARBI1Q96MB7 349 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 CDC42EP3Q9UKI2 254 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 FLVCR2Q9UPI3 526 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 MMP23AO75900 390 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 IFNA17P01571 189 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 RUSC1-AS1Q66K80 236 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZNF880Q6PDB4 577 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 DHRS11Q6UWP2 260 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 IL17RELQ6ZVW7 336 aa9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 C12orf45Q8N5I9 185 aaPredicted RBP9.11□□□□□ -0.95
TNFAIP3-201ENST00000237289 C3orf85A0A1B0GTC6 90 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 C15orf65H3BRN8 121 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 CD5LO43866 347 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 KRASP01116 189 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 SP6Q3SY56 376 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 MIDNQ504T8 468 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 DRAM1Q8N682 238 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 BVESQ8NE79 360 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 IGFBPL1Q8WX77 278 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 OOSP1A8MZH6 123 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 BUB1B-PAK6H3BSN5 160 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 L7N2F9 121 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 VAMP2P63027 116 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 PAX5Q02548 391 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 CT45A1Q5HYN5 189 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 TMEM268Q5VZI3 342 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 FOXRED2Q8IWF2 684 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 BEND2Q8NDZ0 799 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 OR2T10Q8NGZ9 312 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 CT45A3Q8NHU0 189 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 SAA2-SAA4A0A096LPE2 208 aa9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 SAA2P0DJI9 122 aaPredicted RBP9.1□□□□□ -0.95
TNFAIP3-201ENST00000237289 GSG1LQ6UXU4 331 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms