RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 GAB2Q9UQC2 676 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 RNF114Q9Y508 228 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 CEPT1Q9Y6K0 416 aa9.03□□□□□ -0.96
SF3B6-201ENST00000233468 IGKV1-6A0A0C4DH72 117 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 OR5H14A6NHG9 310 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 FGF16O43320 207 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 CHST1O43916 411 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 SSX5O60225 188 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
SF3B6-201ENST00000233468 ELK1P19419 428 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 MDKP21741 143 aaPredicted RBP9.02□□□□□ -0.97
SF3B6-201ENST00000233468 CD24P25063 80 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 LUMP51884 338 aaPredicted RBP9.02□□□□□ -0.97
SF3B6-201ENST00000233468 TAS2R46P59540 309 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 CBX3Q13185 183 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 EBI3Q14213 229 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 HERPUD1Q15011 391 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 SHISA2Q6UWI4 295 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 CCBE1Q6UXH8 406 aaPredicted RBP9.02□□□□□ -0.97
SF3B6-201ENST00000233468 C5orf24Q7Z6I8 188 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 LINC01006Q8NI28 216 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 AGMATQ9BSE5 352 aa9.02□□□□□ -0.97
SF3B6-201ENST00000233468 NOTCH1P46531 2555 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 IGHV3-72A0A0B4J1Y9 119 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 NCBP2LA6PVI3 153 aaKnown RBP9.01□□□□□ -0.97
SF3B6-201ENST00000233468 RBBP9O75884 186 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 APOA2P02652 100 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 OR8U9P0C7N5 309 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 OR3A3P47888 321 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 MRPS10P82664 201 aaKnown RBP9.01□□□□□ -0.97
SF3B6-201ENST00000233468 DEFA6Q01524 100 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 LSAMPQ13449 338 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 HNF4GQ14541 408 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 ODF3L1Q8IXM7 274 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 H1FOOQ8IZA3 346 aaPredicted RBP9.01□□□□□ -0.97
SF3B6-201ENST00000233468 Q8N2B8 174 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 OR5AP2Q8NGF4 316 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 OR8U1Q8NH10 309 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 DYNC2LI1Q8TCX1 351 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 BORCS5Q969J3 196 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 ABHD14BQ96IU4 210 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 ADTRPQ96IZ2 230 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 EAF1Q96JC9 268 aaPredicted RBP9.01□□□□□ -0.97
SF3B6-201ENST00000233468 RNF5Q99942 180 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 NABP2Q9BQ15 211 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 MRPL20Q9BYC9 149 aaKnown RBP9.01□□□□□ -0.97
SF3B6-201ENST00000233468 OR2D2Q9H210 308 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 EXTL2Q9UBQ6 330 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 RNF150Q9ULK6 438 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 OR2W1Q9Y3N9 320 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 WNK1Q9H4A3 2382 aa9.01□□□□□ -0.97
SF3B6-201ENST00000233468 IGKV1D-8A0A087WSZ0 117 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 H7C2Y5 167 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 HLA-DQB1P01920 261 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 OR5H8P0DN80 308 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 VDAC2P45880 294 aaPredicted RBP9□□□□□ -0.97
SF3B6-201ENST00000233468 SRSF4Q08170 494 aaKnown RBP9□□□□□ -0.97
SF3B6-201ENST00000233468 CDK10Q15131 360 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 RPL39P5Q59GN2 51 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 SNX29P2Q8IUI4 249 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 GVQW1Q8N7I0 195 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 RASL11BQ9BPW5 248 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 ZNF251Q9BRH9 671 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 C6orf62Q9GZU0 229 aaPredicted RBP9□□□□□ -0.97
SF3B6-201ENST00000233468 KIAA1456Q9P272 454 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 WASHC3Q9Y3C0 194 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 CMYA5Q8N3K9 4069 aa9□□□□□ -0.97
SF3B6-201ENST00000233468 KIAA2026Q5HYC2 2103 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 M0R1X1 148 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 CT45A6P0DMU7 189 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 CT45A5P0DMU8 189 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 CT45A7P0DMV0 189 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 RRASP10301 218 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 NAT1P18440 290 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 RCVRNP35243 200 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 THBS3P49746 956 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 ACTBP60709 375 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 BLCAPP62952 87 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 ABCA11PQ4W5N1 156 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 PDLIM3Q53GG5 364 aaPredicted RBP8.99□□□□□ -0.97
SF3B6-201ENST00000233468 ACTBL2Q562R1 376 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 C9orf152Q5JTZ5 239 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 PDPNQ86YL7 162 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 ZNF645Q8N7E2 425 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 OR5AN1Q8NGI8 311 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 OR5H2Q8NGV7 314 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 MCFD2Q8NI22 146 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 GPX8Q8TED1 209 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 GIMAP1Q8WWP7 306 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 FCAMRQ8WWV6 532 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 DIRAS2Q96HU8 199 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 PARP12Q9H0J9 701 aaKnown RBP8.99□□□□□ -0.97
SF3B6-201ENST00000233468 MMP27Q9H306 513 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 ZNF702PQ9H963 129 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 LIN7CQ9NUP9 197 aaKnown RBP8.99□□□□□ -0.97
SF3B6-201ENST00000233468 DSCAML1Q8TD84 2053 aa8.99□□□□□ -0.97
SF3B6-201ENST00000233468 MEIS3P1A6NDR6 274 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 CTDSP2O14595 271 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 PTHLHP12272 177 aa8.98□□□□□ -0.97
SF3B6-201ENST00000233468 NFYAP23511 347 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms