RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 KCNS1Q96KK3 526 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 DLL1O00548 723 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 ZNF502Q8TBZ5 544 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 TMEM196Q5HYL7 178 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 ZNF430Q9H8G1 570 aaPredicted RBP7.13□□□□□ -1.27
APOB-201ENST00000233242 USP54Q70EL1 1684 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 IGHV3-43A0A0B4J1X8 118 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 IGHV3-43DP0DP04 118 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 IGFBP6P24592 240 aaPredicted RBP7.13□□□□□ -1.27
APOB-201ENST00000233242 OR2I1PQ8NGU4 316 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 ZNF414Q96IQ9 312 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 NUDT3O95989 172 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 HOXB3P14651 431 aaPredicted RBP7.13□□□□□ -1.27
APOB-201ENST00000233242 LGALS7P47929 136 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 CSRP3P50461 194 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 TMEM187Q14656 261 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 GNRHR2Q96P88 292 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 ZNF646O15015 1829 aaPredicted RBP7.13□□□□□ -1.27
APOB-201ENST00000233242 METTL12A8MUP2 240 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 SHISA8B8ZZ34 492 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 SPRY3O43610 288 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 SIPA1L3O60292 1781 aaPredicted RBP7.13□□□□□ -1.27
APOB-201ENST00000233242 MYOFQ9NZM1 2061 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 MGAT2Q10469 447 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 ADIPOQQ15848 244 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 TNXAQ16473 311 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 TMEM30BQ3MIR4 351 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 CHODLQ9H9P2 273 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 PCOLCE2Q9UKZ9 415 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 ZP1P60852 638 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 PAPPA-AS1Q5QFB9 102 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 SARGQ9BW04 601 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 TNFAIP6P98066 277 aaPredicted RBP7.13□□□□□ -1.27
APOB-201ENST00000233242 ZNF645Q8N7E2 425 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 LINC00614P0C842 121 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 C10orf126Q8N4M7 172 aa7.13□□□□□ -1.27
APOB-201ENST00000233242 PGLYRP1O75594 196 aaPredicted RBP7.12□□□□□ -1.27
APOB-201ENST00000233242 NTN1O95631 604 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 WIPI1Q5MNZ9 446 aaPredicted RBP7.12□□□□□ -1.27
APOB-201ENST00000233242 PRSS41Q7RTY9 318 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 OR2Y1Q8NGV0 311 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 TMEM190Q8WZ59 177 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 WDYHV1Q96HA8 205 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 ASCL3Q9NQ33 180 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 ARL14EPLP0DKL9 152 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 SPANXN1Q5VSR9 72 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 SLC25A40Q8TBP6 338 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 SPEM1Q8N4L4 309 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 ABHD14AQ9BUJ0 271 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 CACNA1BQ00975 2339 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 ZNF788Q6ZQV5 615 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 LPAL2Q16609 132 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 ZPLD1Q8TCW7 415 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 RND1Q92730 232 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 TMEM242Q9NWH2 141 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 TBL2Q9Y4P3 447 aaKnown RBP7.12□□□□□ -1.27
APOB-201ENST00000233242 RBFOX2O43251 390 aaKnown RBP eCLIP7.12□□□□□ -1.272e-8■■■□□ 17.4
APOB-201ENST00000233242 RELQ04864 619 aaPredicted RBP7.12□□□□□ -1.27
APOB-201ENST00000233242 SIGLEC14Q08ET2 396 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 WNT2BQ93097 391 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 IMMP2LQ96T52 175 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 RNF224P0DH78 156 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 LAMTOR2Q9Y2Q5 125 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 CXorf66Q5JRM2 361 aaPredicted RBP7.12□□□□□ -1.27
APOB-201ENST00000233242 SELENOHQ8IZQ5 122 aaKnown RBP7.12□□□□□ -1.27
APOB-201ENST00000233242 Q96M66 194 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 ZNF658BQ4V348 819 aaPredicted RBP7.12□□□□□ -1.27
APOB-201ENST00000233242 SOSTQ9BQB4 213 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 GPR35Q9HC97 309 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 MPDZO75970 2070 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 SRP19P09132 144 aaKnown RBP7.12□□□□□ -1.27
APOB-201ENST00000233242 C8orf88P0DMB2 117 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 ONECUT1Q9UBC0 465 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 NBASA2RRP1 2371 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 ARF6P62330 175 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 SH3BGRL3Q9H299 93 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 IL36RNQ9UBH0 155 aa7.12□□□□□ -1.27
APOB-201ENST00000233242 PRNTQ86SH4 94 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.11□□□□□ -1.275e-20■■■■□ 23.6
APOB-201ENST00000233242 CEACAM18A8MTB9 384 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 TMEM262E9PQX1 116 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 PIN1P1O15428 100 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 SRFP11831 508 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
APOB-201ENST00000233242 TMEM177Q53S58 311 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 TMEM14DPA8MWL7 114 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 TMEM108Q6UXF1 575 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 TMEM170AQ8WVE7 144 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 OR8B2Q96RD0 313 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 PLSCR2Q9NRY7 297 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 PPP1R17O96001 155 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 SSPNQ14714 243 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 GPX4P36969 197 aaPredicted RBP7.11□□□□□ -1.27
APOB-201ENST00000233242 ID1P41134 155 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 STARD6P59095 220 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 IGHV1OR21-1A0A087WYE8 117 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 A0A1B0GTI1 187 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 SPCS1Q9Y6A9 102 aa7.11□□□□□ -1.27
APOB-201ENST00000233242 CDIPTO14735 213 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms